Populus trichocarpa (black cottonwood): 18093979
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Entry
18093979 CDS
T01077
Name
(RefSeq) autophagy-related protein 8f
KO
K08341
GABA(A) receptor-associated protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
18093979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18093979
04121 Ubiquitin system [BR:
pop04121
]
18093979
03029 Mitochondrial biogenesis [BR:
pop03029
]
18093979
Membrane trafficking [BR:
pop04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
18093979
Ubiquitin system [BR:
pop04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
18093979
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
18093979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
18093979
NCBI-ProteinID:
XP_024461728
LinkDB
All DBs
Position
1:complement(10050253..10053095)
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AA seq
122 aa
AA seq
DB search
MAKSYFKQEHGLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ
FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEDKKDEDGFLYVTYSGENTFGSQI
PL
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagagttacttcaagcaagagcatggtcttgagaagaggagggcagaggctgcc
aggatcagggagaagtacccagataggattcccgtgatcgtggagaaggcagaaagaagt
gatataccaaacatagacaagaaaaagtaccttgttccagctgacctgactgtaggacag
tttgtctatgttatccgcaaaagaatcaagttgagtgcagaaaaggcaatctttatattt
gtggataatgtcctcccacccacaggtgctatcatgtctgcaatatatgaggataaaaag
gatgaagacgggtttctctatgtgacctacagcggagagaacacttttgggtctcagatt
ccactgtag
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