Populus trichocarpa (black cottonwood): 18094054
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Entry
18094054 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18094054 isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_31_2nd
Gal_mutarotas_2
DUF5110
Glyco_hydro_31_3rd
Gsf2
Motif
Other DBs
NCBI-GeneID:
18094054
NCBI-ProteinID:
XP_024449420
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Position
1:complement(10602002..10612218)
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AA seq
1060 aa
AA seq
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METVLVGSSGQQRGLTPTISKLRHHHKLPPPHSLFPTSTTTCTSAVTLASRKRRLNKKLS
CRGLMSKMADHDQAKVVAADVVSGDMIFQPILEDGIFRFDCSAEARAASYPSLSFIRSSD
RDTPIMSHSVPSYTPTYECVSGKQIVKFEFPDGTTFYGTGEVSGQLERTGKRVFTWNTDA
WGYGPGTTSLYQSHPWVLAVLPNGEALGVLADTTLRCEIDLRKESIIQFIAPSSYPVVTF
GLFASPTDVLKSLSHAIGTVFMPPKWSLGYQQCRWSYDSDERVREIARTFREKGIPCDVI
WMDIDYMDGFRCFTFDQERFRDPQSLVKDLHDDGFKAIWMLDPGIKKEEGYLIYDSGSEN
DAWIKKADGEPFVGEVWPGPCVFPDFTQSKVRAWWALLVKDFTSNGVDGIWNDMNEPAVF
KTVTKTMPESNLHLGDEEIGGCQNHSHYHNVYGMLMARSTYEGMKLANENKRPFVLTRAG
FIGSQRYAATWTGDNLSNWEHVHMSISMVLQLGLSGQPLSGPDIGGFAGNATPKLFGRWM
GVGAMFPFCRGHSEKSTNDHEPWSFGEECEEVCRLALKRRYRLLPHIYTLFYLAHTTGIP
VATPTFFADPKDPGLRTTENSFLLGPLLVFSSTIADQGMDRLHPVLPKGIWLRFDFDDSH
PDLPTLYLQGGSIIPLAPPHQHVGEANLSDDLTLLVALDQNGHAEGLLFEDEGDGYEFTR
GGYLLTRYVAELQSSAVTVRVSQMEGSWKRPRRRLRVQLLLGGGAMLDSWGIDGDVLKIN
MPTEVEVSTLVSTSEKQYRTRLECAKHIPELEEVSGPKGVVDLSKVPVELKNGDWIAKVV
PWIGGRIISMEHLPSGTQWLHSRVEIDGYEEYSGTEYRSAGCSEEYSVIERDLEHAEEEE
SLILEGNIGGGLVLRRQISILKDNPKILQIDSGIIARSVGAGSGGFSRLVCLRVHPAFTL
LHPTETFVSFTSIDGSKHEIWPESGDQFYQENLLPNGEWMLVDQCQGLALVNRFNINEVF
KCYIHWGTGTVNLELWSEDRPVSKQSPLTVSHGYEVRGIS
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagtactggtgggcagtagtggacaacaacgtggactaacaccgacaatctca
aagcttaggcatcatcataaactccctcctcctcactctctcttccccacttcaacaacc
acctgcacatcagccgttacactcgcttccagaaagaggaggcttaataagaagttaagt
tgcaggggattgatgtcaaaaatggctgatcatgatcaagctaaggtagtcgctgctgat
gttgtctcaggggatatgatttttcagcctatcttggaggatgggatttttcgatttgat
tgttctgcagaagctagagctgcttcatatcccagcctttcattcatccgtagctcagat
agggacacgccaatcatgagtcacagtgttccttcatatacccctacttatgaatgtgtt
tctgggaagcagattgttaaattcgagtttcctgatggtaccaccttttatggaactgga
gaagttagtggacagcttgagaggaccggaaaaagagttttcacatggaacacggatgca
tggggttatggtcctggaactacatcattgtaccagtcacatccttgggtgctggctgtt
cttccaaatggagaggcgttaggggttcttgcagacaccacgctacgctgtgagattgat
ctgaggaaggaatcaataattcagttcattgctccatcatcgtaccctgttgttacattt
ggtctttttgcttctcccacagatgttctgaaatctttgtctcacgccattggaactgtt
tttatgcctccaaagtggtcgttaggctatcaacaatgccggtggagctatgattcagat
gagagagttcgcgagattgccagaacttttcgagagaagggcataccatgtgatgttata
tggatggatattgactacatggatggctttcgctgtttcacatttgaccaggaacgtttt
cgagatccacaatctttggtaaaagatctccatgatgatggatttaaagcgatttggatg
cttgaccctggtatcaagaaagaagaaggatatttgatctatgacagtggttctgaaaat
gatgcatggatcaagaaagcagatggggagccatttgttggggaggtatggcctgggccc
tgtgtttttcctgatttcacacaatcaaaagttcgcgcttggtgggctcttttagttaaa
gattttacatctaatggtgttgatggcatatggaatgatatgaatgagccagctgttttc
aaaactgttacaaagacgatgcctgagagcaatttacatctaggagatgaagaaattgga
ggttgtcagaatcactcacactatcacaatgtatatggcatgcttatggcaagatcaaca
tatgaggggatgaagttagccaatgaaaataagcgtccttttgtactcaccagagctgga
tttattggtagtcaaaggtatgctgcaacatggacgggagataacctttcaaactgggag
cacgtacacatgtctatctccatggtacttcaattgggactcagtggtcagccactctct
ggacctgatattggtggatttgctggaaatgcaacacccaaactttttggaaggtggatg
ggtgtgggtgctatgtttcctttctgccgtgggcattctgaaaagagcacaaatgatcat
gagccatggtcttttggggaagagtgtgaagaagtgtgccgtctagcattaaagaggcgc
tatcgacttctaccacatatatacactctgttttatttggcacacacaacaggtatcccg
gtggcaactccaactttctttgctgatccaaaagatcctggcttaaggaccactgaaaat
tccttcctgctgggtcctcttcttgtcttttcaagcaccattgctgatcagggaatggat
agattgcatccagtgctgcccaagggaatctggttgagatttgattttgatgattcacac
ccggatttaccgacattatatttgcaaggaggatcaataattcctttggctcccccacat
cagcatgttggtgaagcaaatctgtcagatgacttgacactccttgtagctttagatcaa
aatgggcatgctgaaggattactatttgaagatgaaggtgatgggtatgaattcaccaga
ggtggatatctgttgacacgttatgtcgccgaacttcaatcttcagctgttactgtcaga
gtttcccaaatggaaggatcatggaagaggcccagacgccgtctgcgtgtgcagttattg
cttggtggaggtgcaatgcttgactcatggggcatagatggagatgtcctgaaaatcaat
atgcccacagaagttgaagtttctacactggtgtccaccagtgagaaacaatacaggacc
cggttagaatgtgccaagcatattccagagttggaagaggtttctggacccaagggagta
gtggatctttcaaaagtccctgttgaattgaaaaacggtgattggattgctaaagtagtt
ccctggattggaggcagaattatttccatggagcaccttccttcgggaacacagtggctt
catagcagggttgagattgatggatatgaagagtatagtggtaccgagtaccggtcagca
ggatgttctgaagaatatagtgtcattgagcgggatcttgagcatgcagaagaggaggaa
tctcttattttagaaggtaatattggtggagggctggttcttcgacggcagatatctata
ctcaaagataatccaaagattctccagattgactctggcattatagcccgcagcgttggt
gctggttctggtggattttcaagactggtttgcttgagagtacacccggcgtttactctc
cttcaccccactgaaacttttgtctcattcacctccattgatggatcaaagcatgaaata
tggcctgaatctggggatcagttctatcaagagaatcttctgcctaatggtgaatggatg
ctggtggatcaatgtcagggcttggctttagtcaatcggtttaacattaatgaggttttt
aagtgttacatccattggggaacagggacagtaaatctggagctgtggtctgaagatagg
cctgtttcaaagcaatcacctctcacagtgtcccatgggtatgaggtgagaggaatctcg
tag
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