Populus trichocarpa (black cottonwood): 18094346
Help
Entry
18094346 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase KEG isoform X1
KO
K16279
E3 ubiquitin-protein ligase KEG [EC:
2.7.11.1
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pop01001
]
18094346
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
18094346
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18094346
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
18094346
Protein kinases [BR:
pop01001
]
Serine/threonine kinases: TKL group
RIPK family [OT]
18094346
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18094346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_15
Ank_2
Ank
Ank_4
Ank_5
Ank_3
PK_Tyr_Ser-Thr
Pkinase
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
zf-RING_4
zf-C3HC4_2
zf-rbx1
Tmemb_55A
RING_XB3-XBAT31
Prok-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
18094346
NCBI-ProteinID:
XP_006368632
UniProt:
A0A2K2BRI4
LinkDB
All DBs
Position
1:complement(2202407..2214911)
Genome browser
AA seq
1621 aa
AA seq
DB search
MKVPCCSVCQTRYDEEERVPLLLQCGHGFCKDCLSRMFSASTDTTLVCPRCRHVSVVGNS
VTALKKNFAVLALLHSSSSSSAAANFDCDYTDDEGDGDEEDFEEERCSRGSHASSSGACG
PVIDVGAHPEVKLVKKIGEGRSKSGMETWTAVIGGGGVHGKKVCRHRVAVKKVEIGEEME
VDWVLGQLESLRKAAMWCRNVCTFHGVVKMDGCLGIVTDRCYGSVESEMQRNEGRLTLEQ
ILRYGADIARGVAELHAAGVVCMNIKPSNLLLDSSGRAVVSDYGLAAILKKPACRKARSE
CDSAKIHSCMDCTMLSPNYTAPEAWEPVKKSLNLFWDDAIGISVESDAWSFGCALVEMCT
GSIPWAVLSADEIYRAVVKGRKLPPQYASVVGVGMPRELWKMIGECLQFKASKRPAFSAM
LAIFLRHLQELPRSPPASPDNSFAKYPRSYVKEPPLASDLEVFQDNPGHLHRLVSEGDVS
GVRELLAKVASRNDNFPISMLLEAQNADGQTALHLACRRGSSELVRAILEYREADVDVLD
KDGDPPLVFALAAGSPECVRALIERGANVRSRLREGFGPSVAHVCAYHGQPDCMRELLLA
GADPNAIDDEGESVLHRAVSKKYTDCALVILENGGCGSMAVPNSKNLTPLHLCVATWNVA
VVRRWVEVASPEEIADAIDIPSPVGTALCMAAAAKKDHETEGRELVRILLFAGADPTAQD
AQHGRTALHTAAMANDVELVKIILDAGVDVNIRNVQNTIPLHVALARGAKSCVGLLLSAG
ANCNMQDDEGDNAFHIAAETAKMIRENLEWLILMLRNSNAAVEVRNHSGKTLRDFLEALP
REWISEDLMEALVNRGVHLSPTIFEVGDWVKFKRSVTTPTHGWQGAKHKSVGFVQTVVDK
DNLIVSFCSGEARVLANEVLKVIPLDRGQHVQLKQDVKEPRFGWRGQSRDSIGTVLCVDD
DGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPTLTTAKHGLGSVTPGSIGIVYC
IRPDNSLLLELSYLPNPWHCEPEEVEPVAPFKIGDRVCVKRSVAEPRYAWGGETHHSVGR
ISEIENDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNS
IGVIHSLEEDGDMGVAFCFRSKPFCCSVTDVEKVPPFEMGQEIHVLSSVTQPRLGWSNES
PATVGKIVRIDMDGALNVRVTGRHSLWKVSPGDAERLSGFEVGDWVRSKPSLGTRPSYDW
NSIGKESLAVVHSIQETGYLELACCFRKGRWIAHHTDIEKVPCFKVGQHVRFRTGLSEPR
WGWRGAQPDSRGIITSVHADGEVRIAFFDLPGLWRGDPADLEVEHIFEVGEWVKLRGDVS
NWKSVGPGSVGVVQGIGYDGDEWDGSIYVGFCGEQERWAGPTSHLERVERLMVGQKVRVK
LSVKQPRFGWSGHSHGSVGTIAAIDADGKLRIYTPVGSKTWMLDPSEVELVEDEELHIGD
WVKVRASVSTPTHQWGEVNHSSTGVVHRMENGDLWVSFCFLEKLWLCKALEMERIRPFKV
GDKVKIREGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFHWREGRPWIGDPADIVLDE
S
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcccttgctgctcagtttgccaaacgcggtatgacgaggaagagagagttcct
ctacttctccaatgcggtcatggattctgcaaagactgtctctctcgaatgttctctgct
tctaccgatacaacacttgtctgccctagatgccgacacgtgtcggtcgtaggcaactca
gtcaccgcactgaagaagaacttcgccgttttagctctgctccattcctcctcgtcgtct
tcggcggcggcgaacttcgattgcgattacactgacgacgagggtgatggtgacgaagag
gatttcgaggaggagaggtgtagccgcgggtcccacgcgtcgagttctggtgcctgtggg
ccggtgattgatgtcggggcccacccagaggtgaagttggtgaagaaaattggtgaaggg
aggagtaaatctgggatggagacgtggacggcggtgattggtggcggcggggtccatggg
aagaaggtgtgtaggcaccgggtggcggtgaagaaggtggagataggggaggagatggag
gtggactgggtgttagggcagttggagagtttgagaaaggcggcgatgtggtgtaggaat
gtgtgtacttttcatggtgttgtaaaaatggatgggtgtttagggattgttacggatagg
tgttatggttctgttgaatcggagatgcaaaggaatgaaggaaggcttactctcgagcaa
attctaagatatggtgctgatatagctcgaggagtggctgaacttcacgcagcaggtgtt
gtttgcatgaacataaaaccgtcgaatcttcttttggattcaagtggtcgtgcggtcgtt
tctgattatggacttgctgcaattctaaagaaacctgcctgtaggaaagctcgatcagag
tgtgattctgcaaaaatccattcatgcatggactgtacaatgcttagtccgaactataca
gctccagaggcatgggagccggtaaagaaatcattgaatctgttctgggatgatgcaata
ggtatatccgtggagtcagacgcctggagttttggttgtgctttggtggagatgtgcact
ggttctatcccgtgggctgttttaagtgcagatgaaatttatcgagctgttgtgaagggt
cgaaagttgcctccacagtatgcaagtgtagtaggtgttggaatgcctagagaattgtgg
aagatgattggagaatgcctacaattcaaagcatcgaaaaggccagcttttagtgcaatg
ttagcaatattcctccgtcatttgcaggagttgccacgcagccctcctgcaagtcctgat
aacagctttgcaaaatatcctaggtcatatgtgaaggaacctccccttgcttctgatttg
gaggtatttcaggataaccctggccatctacatcgattagtgtcagaaggggatgttagt
ggtgttagggaattacttgcaaaggttgcatcacgaaatgacaatttcccaatatctatg
ctattagaagcgcagaatgctgatggccaaactgctcttcacttagcttgcagacgtggt
agttcagagcttgttagggctatattggagtacagagaggcagatgttgatgtattggac
aaagatggggatcctccacttgtttttgctttagctgcaggatccccagaatgtgttcgt
gctctcattgaaagaggggctaatgtaagatctaggttgagggaaggttttggtccatct
gttgctcatgtttgtgcataccacggccaacctgattgcatgcgtgagctgctattggct
ggagctgatccaaatgcaattgatgatgaaggtgaatctgtattgcacagagctgtttcc
aagaaatatacagattgtgctcttgttatactggaaaatgggggttgtgggtccatggct
gtcccaaattcaaaaaatttgacgccattgcacttgtgtgtagcaacatggaatgtggct
gttgtgagaaggtgggtagaagttgcatccccagaagaaattgctgatgccattgatata
ccaagtcctgttggaactgcattatgcatggcggctgctgcgaagaaagatcatgaaact
gaagggagagaacttgtgcgaatattactttttgctggagcagatccaactgcccaagat
gctcaacatgggcgaacagccttacatactgctgctatggctaatgatgttgaattggtc
aaaattattcttgatgctggagtggatgtaaacattcggaacgtgcagaatacaatacct
ctccatgtagccttggcaagaggggcaaagtcatgtgttgggttgctcttatctgcaggg
gcaaattgtaatatgcaggatgatgaaggggacaatgctttccacatagcagctgaaaca
gcaaaaatgatacgtgagaatcttgaatggctcatccttatgctcaggaattctaatgct
gctgttgaagttagaaaccacagtggtaagacactccgtgactttttggaggcccttcct
cgggaatggatttctgaagatttgatggaggcacttgtgaataggggagttcatctatct
cctacaatatttgaagtgggggattgggtgaagttcaaaagaagtgtcactactcctacg
catgggtggcaaggtgcaaaacacaaaagtgtaggctttgtgcaaactgttgtggacaag
gacaaccttattgtgtcattttgctctggagaggctcgtgtgttagccaatgaagttttg
aaggtgattcctttggataggggacagcatgtccagcttaagcaagatgtcaaagaacca
cggtttggctggcgtggtcaatcacgtgacagcatcggaactgttttatgtgttgacgat
gatggcatacttcgtgttggatttccgggagcatctagaggatggaaagctgaccctgcc
gagatggaaagagtcgaagaatttaaggtgggtgactgggttcgcatccggcccacactt
acaactgccaagcacggtctaggatctgtcacacctgggagcattggtattgtgtattgt
attagaccagataatagtcttttgttagagttgagctatcttccaaatccatggcattgt
gaaccagaggaggttgagcctgttgctcctttcaagattggtgaccgggtgtgtgtgaag
cgatctgttgcagaacctagatatgcttggggcggcgaaacacatcacagtgttggaaga
attagtgagatagagaatgatggcttgcttataattgaaataccaaatcgacctatacca
tggcaggctgatccatcagacatggaaaaggttgaagattttaaggttggggattgggtt
agagtgaaggcttcagtatcttctccaaagtatggatgggaagacatcacacggaacagt
attggggtaattcacagcctggaagaggatggtgacatgggtgtggcattctgtttcaga
agcaagcctttttgttgctctgtgacagatgttgaaaaggtgcctccttttgaaatggga
caagagatacatgtcttgtcatctgtgactcaaccacgtcttggatggtcaaatgaaagt
cctgcaactgttggaaagattgtgagaattgacatggatggagctttgaatgtgagggtt
actggcagacatagcttgtggaaagtttctcctggagatgcagaaaggctttcgggattt
gaagttggtgattgggtacgttccaaacctagtttggggactagacctagttatgattgg
aatagtattgggaaggaaagtttagctgttgtacacagcatacaagagacaggttatcta
gaactggcttgttgtttccgtaaaggaagatggattgctcatcacacagatattgaaaag
gtaccttgtttcaaagttgggcagcatgttcggtttcgaactggactgtcggagccgaga
tggggctggagaggggctcagcctgattcgcgaggcataatcacctctgttcatgctgat
ggagaagtgaggattgcattctttgatttgccagggttgtggagaggagatcccgcagat
ctcgaggttgaacatatatttgaagtgggtgagtgggtgaaactgaggggagatgttagt
aactggaaatctgttggaccaggcagtgtgggtgttgtacagggtataggatatgatgga
gatgagtgggatggaagcatatatgttggtttttgtggggagcaagaaagatgggcgggg
cctacttcccatcttgaaagagttgaaagactcatggttgggcagaaagttagggttaaa
ctttctgtgaagcagccaaggtttgggtggtcaggccacagtcatggaagtgttggaacc
atagcggcaattgatgctgatgggaagctgagaatatatactccagtaggctccaagact
tggatgcttgatccatcagaagtggagctggtagaggatgaagaacttcacattggagat
tgggtgaaggttagggcatccgtttcaacaccaacacaccagtggggagaagtgaatcat
tcaagcactggagtggtgcatcggatggaaaatggggacctatgggtttcattctgtttc
ctggagaagctgtggctttgcaaggctttggaaatggaacgaattagaccattcaaagta
ggcgacaaggtgaaaattagagaaggtctggtaacacctcggtgggggtggggaatggag
actcatgcaagcaagggccaggtagttggggtagatgcaaatggaaagttgaggattaag
tttcattggagagaagggaggccatggatcggagatcctgctgacattgttcttgatgag
agctaa
DBGET
integrated database retrieval system
