Populus trichocarpa (black cottonwood): 18094348
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Entry
18094348 CDS
T01077
Name
(RefSeq) transcription factor TGA2 isoform X1
KO
K14431
transcription factor TGA
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18094348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18094348
Transcription factors [BR:
pop03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
18094348
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Gene cluster
GFIT
Motif
Pfam:
DOG1
bZIP_1
bZIP_2
DUF4407
Arteri_nucleo
Motif
Other DBs
NCBI-GeneID:
18094348
NCBI-ProteinID:
XP_024446961
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Position
1:2233614..2242676
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AA seq
465 aa
AA seq
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MPSFDPQLPISNAICVEGSTIHPHCATYFGVFLEDDAIDLSPGAVFNSAKERTQAIPSDP
LTSGALDKKQSSSVQVESQRLPLEKVQRLNRVSIPSVGTENWGETQKLLLENIQQSNQVS
IPSVNTENWGETNMADASPRTDISTDADTDDKNQRFDGSLSTALVASDSSDRSKDKMDQK
TLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFVSSSGDQSHSM
SGNGAMAFDVEYARWLEDQNRQINELRSAVNSHTGDTELRIIIDGIMAHYDEVFRLKSNA
AKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTDQQLVGIGNLQQSSQQ
AEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADN
LRQQTLQQMQRILTTRQSARALLAIHDYFSRLRALSSLWLARPRE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgccgagctttgatcctcagttaccaatttcaaacgcaatttgtgtagagggaagcaca
atccatcctcactgtgctacttattttggggtgttcttagaggacgatgctattgacctg
agtccaggtgctgtgttcaattcagcaaaagaaagaacgcaagcaatcccttctgacccc
ctcactagtggtgctttggacaagaaacagtcatcttctgtccaagtggagtctcagagg
ttaccattagaaaaagttcaaaggttaaaccgggtttctataccaagtgttggtacagaa
aactggggggagactcagaagttactgttagaaaacattcaacagtcaaaccaggtctct
ataccaagtgttaatactgagaactggggggagacaaatatggctgatgctagtccgagg
actgatatctcaacagatgcagacacagatgataaaaatcaaaggtttgatggaagtcta
tctacagctcttgtggcgtctgattccagtgacagatcaaaggataaaatggaccagaag
actcttcgtaggcttgctcaaaatagagaagctgcaagaaaaagccgtttgaggaagaaa
gcatatgtccagcagctggagagtagccggttgaagctaacccaactggaacaggagctt
caacgggcacggcagcagggaattttcgtatcaagctcaggagaccaatctcattcaatg
agtggaaatggggccatggcatttgatgtagaatatgcacgatggctggaggaccaaaat
cgacaaattaatgagctgagatcagctgtcaattctcacactggtgatacagaacttcgt
attatcattgatggtataatggctcattatgatgaagttttcaggctgaagagcaatgca
gccaaggctgatgttttccatttgctgtctggcatgtggaagacgcctgcagagaggtgt
tttttgtggcttggtggcttccgttcatctgaactcctcaagcttcttgtgaatcaattg
gagcctttaacagaccagcagttggtgggcattggcaacttgcagcagtcctcccaacag
gcagaagatgcattatctcaagggatggaggcattgcagcagtccctggctgagacattg
tccagcggatctcttggctcctcaggttcctctggaaacgtggcaaattacatgggtcag
atggccatggccatgggaaaactaggcaccctcgagggatttattcgccaggctgacaat
ttgaggcagcaaacattacagcaaatgcaacgaatattaaccacccgtcagtctgctcgt
gctctcctcgcaatacacgattacttctcccgtttacgagctcttagttccctctggctt
gcgcgaccgagagagtga
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