KEGG   Populus trichocarpa (black cottonwood): 18094407
Entry
18094407          CDS       T01077                                 
Name
(RefSeq) cullin-1 isoform X1
  KO
K03347  cullin 1
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04120  Ubiquitin mediated proteolysis
pop04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    18094407
   04120 Ubiquitin mediated proteolysis
    18094407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    18094407
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     18094407
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 BLOC1S3
Other DBs
NCBI-GeneID: 18094407
NCBI-ProteinID: XP_006368709
LinkDB
Position
1:complement(9530238..9536739)
AA seq 737 aa
MGERKTIELEQGWEYMRKGITKLKGILDGSLEQFNSEEYMMLYTTIYNMCTQKPPNDYSQ
QLYDKYREAFQVYINSTVLPSIREKHDEFMLRELVKRWANHKIMVRWLSRFFHYLDRYFI
ARRSLPPLNEVGLTCFRDLVYQEVNSKAKDAVLDVISKERDGEQIDRALLKNVLDIFVEI
GMSQMDHYEDDFEAHMLQGTSAYYSVKAANWIREDSCPDYMIKAEECLKRERERVSHYLH
SSSETKLVEKVQHELLVVHANQLLEKEHSGVHSLLRDDKLDDLSRMFRLYHKVPHGLEPV
SNVFKQHITAEGTALVQQAEDAASSQAANGGVQEQVLIRKIIELHDKYMTYVTDCFQNHT
LFHKAMKEAFEIFCNRTVAGSSSAEQLATFCDTILRKGGSEKLSDEAIEETLEKVVKLLA
YISDKDLFAEFYRKKLARRLLFDRSANDEHERSILSKLKQQCGGQFTSKMEGMVTDLQLA
KEHQSSFDEYLGNNPTTRTGIDLQVSVLTTGYWPSYKSSDINLPAEMARGVEVFKEFYDN
KSKHRKLTWIYSLGSCHINARFDQKPIELVVTTYQACLLMLFNTSDKLGYPEIMTQSNLS
DDDLPRLLHSLSCGKYKILSKEPNTKTVTQNDSFEFNRKFNDRMRRIKVPLPLVDERKKV
VEDVHKDRRYAIDAAIVRIMKSRKVLGHQQLVMECVEQLTRMFKPDIKAIKKRIEDLISR
DYLERDKENPNMFRYLA
NT seq 2214 nt   +upstreamnt  +downstreamnt
atgggtgagcgcaagactattgaacttgagcaaggatgggaatatatgcggaaagggatc
acaaagctgaaggggattctggatggatcactggagcaattcaactcagaagaatatatg
atgctttacacaactatctacaatatgtgtactcagaagccacccaatgactattctcag
cagctttatgacaagtacagggaggcgtttcaagtatatataaactccacggtattacca
tcgataagggagaagcacgatgagtttatgctgagggagcttgtgaaaagatgggctaac
cataaaattatggttaggtggttgtcacgcttctttcattatcttgaccgttacttcatt
gctcggaggtcacttcctccacttaatgaagttggactgacttgcttccgtgatctggtt
tatcaggaagtgaatagtaaagcaaaggatgctgtgcttgatgtgattagtaaagaacgc
gacggagaacagattgacagagcactgctgaagaatgttttagatatatttgttgagatt
ggaatgtcacaaatggatcattatgaagatgattttgaagcacatatgcttcaaggtact
agtgcttactattctgttaaagcggcaaactggattcgagaggattcctgtccagattac
atgataaaggctgaggaatgcttgaagagagagagagagagagtttctcattacttgcac
tcaagcagtgagacaaagttagtggagaaagtgcaacacgagttgttggtggtccatgcg
aaccaactgctagaaaaggaacattctggagttcactcattgcttagagatgacaagttg
gatgatctatccaggatgttcaggctttaccataaggttccccatggcttggaacctgtt
tctaatgtattcaagcagcatattactgctgaaggaacagccctggtccagcaggcagaa
gatgctgcgagtagccaggctgcaaatggtggtgttcaggaacaagttctcatccgaaag
ataattgagctgcatgataaatacatgacttatgtgactgattgctttcaaaaccacacc
ttgtttcacaaggccatgaaagaggcttttgagattttttgcaatagaacagttgctggg
agctctagtgctgaacaactggccaccttttgtgatactatcctccgaaaggggggaagt
gagaaactaagtgatgaagccattgaagaaacactggagaaggtggttaagctgcttgca
tatattagtgacaaggacctttttgccgaattttatcggaaaaagcttgcccgtcgtctt
ctttttgatcgaagtgctaatgatgaacatgaaaggagtattctttcaaaattgaagcag
caatgtggtggtcaattcacctcaaagatggaaggaatggtcacagatttgcaactggca
aaggaacaccagtccagctttgacgagtatcttggcaataacccaaccacacgtactggg
attgatttgcaagttagtgttctcacaactgggtactggccaagttataaatcctccgat
atcaacctgcctgcagaaatggctaggggagtggaagttttcaaggagttctatgacaac
aagagtaagcacagaaaacttacatggatttactcgctgggatcttgccacattaatgcc
aggtttgaccaaaaacctattgagctggttgtgacaacctaccaggcttgtctcctgatg
ctttttaatacttcagacaagcttggttaccctgagattatgactcagtcaaacttgagc
gacgatgatttgccccgattgcttcattccctgtcatgtggaaagtataagatccttagc
aaggaaccaaacacaaagactgttacccaaaatgattcctttgagttcaatcgcaagttc
aatgacagaatgaggaggatcaaggttcctcttccacttgttgatgaaagaaagaaggtt
gttgaagatgttcacaaagacagacggtatgcaatcgatgctgcaattgtgcgcatcatg
aagagccggaaagttttgggtcatcaacagctagtcatggagtgtgttgagcaattgact
cgcatgttcaagcctgacattaaagctatcaagaagcgaatagaagatctgatatcccga
gactatttagaaagagacaaggaaaacccaaacatgtttaggtacctggcttga

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