KEGG   Populus trichocarpa (black cottonwood): 18094431
Entry
18094431          CDS       T01077                                 
Name
(RefSeq) protein FIZZY-RELATED 2 isoform X1
  KO
K03364  cell division cycle 20-like protein 1, cofactor of APC complex
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    18094431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    18094431
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     18094431
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd EIF3I WD40_Gbeta ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st eIF2A WD40_MABP1-WDR62_1st Beta-prop_RIG_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 Peptidase_M10_C Beta-prop_SPT8 Tricorn_2nd Beta-prop_SCAP Beta-prop_VPS8
Other DBs
NCBI-GeneID: 18094431
NCBI-ProteinID: XP_024440841
LinkDB
Position
1:complement(9126110..9135818)
AA seq 492 aa
MADPMISQSTQSKLNIAASTTPRHHHHLHLENPTPSPSSSKHVNRLINSNHYISPSRPIY
SDRFIPCRSSSNFALFNISFPQPSATAGISPGCGGKEDNPSAYAALLRNALFGPQTPDKK
DWGAGAAGQNIFRYKMETRQSLHSLSPFGFDDMSDLGVSNVAIKTPRKVSRSPYKVLDAP
ALQDDFYLNLVDWSSHNVLAVGLGNCVYLWNACSSKVTKLCDLGNDDGVCSVGWAHRGTH
LAIGTSNGKVQIWDASRCKRIRTMEGHRLRVGALAWSSSMLSSGSRDKSILQRDIRARED
FVSKLSGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSSQPVLKYCDHTAAVKAIAWS
PHLHGLLASGGGTADRCIRFWNTTTNSHLSCIDTGSQVCNLVWSKNVNELVSTHGYSQNQ
IILWRYPTMSKLATLTGHTFRVLYLAISPDGQTIVTGAGDETLRFWSVFPSPKSQNTDSE
IGASSLGRTTIR
NT seq 1479 nt   +upstreamnt  +downstreamnt
atggctgatcccatgatttcacaatcaacccaatcaaagctcaacattgcagcctccacg
acgccacgtcatcatcatcatctacatcttgaaaacccaactccatcaccgtcatcatca
aagcatgtcaatcgtctcattaattctaatcattatatttccccttcgagaccaatttac
tccgataggtttattccctgcagatccagctcaaatttcgctcttttcaacatctctttt
ccgcagccgtcggcgacggcggggatatcgccgggatgtggagggaaggaggataatcct
agtgcgtatgcggcgttgcttcggaatgcgctttttggtccccagactccggataagaaa
gactggggggcaggggcggctggacagaatattttccggtacaagatggagactaggcag
tcgctgcactcgctttcccctttcggttttgatgatatgagtgatcttggtgttagtaat
gttgctattaagactcctaggaaggtttctagatcaccttataaggtattggacgcccct
gcattgcaagatgatttttatttgaatcttgtggattggtcgtcacataatgtgttggca
gtggggttagggaattgtgtgtatttatggaatgcttgtagtagcaaggtgacaaagttg
tgtgatttggggaatgatgatggtgtatgttcagtaggatgggctcatcgtggtacgcat
cttgctattggaactagcaatggaaaagttcagatttgggatgcttctcgctgtaaaagg
atcagaaccatggagggccatcgattgcgtgttggggccttggcctggagttcatctatg
ctgtcttctggtagccgggataagagcattcttcaacgagatatacgagcacgggaagac
ttcgttagtaaactctctggacacaagtcagaggtttgtggactgaagtggtcttatgat
aaccgtgagttggcatcaggtggaaatgataatcgactctttgtttggaatcaacattca
agccaacctgtgctaaaatactgtgatcatacagcggctgtaaaagcaattgcttggtca
ccccatcttcatggacttcttgcatctgggggtgggactgctgaccggtgtatacgattc
tggaatacaaccactaactcacatctcagctgcatagacactggcagtcaggtgtgcaat
cttgtgtggtctaagaatgtcaatgaacttgtcagcacacatggatactcccaaaaccaa
ataatattgtggagatatcccaccatgtcaaagttggcaactctgacaggtcatacattc
agagttctttatcttgccatctcaccagatggacagacaattgtcaccggagctggagat
gaaacgctgcggttttggagtgtgtttccttcccctaaatctcaaaacactgacagtgaa
attggagcatcctctctcggtagaactacaattcggtga

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