Populus trichocarpa (black cottonwood): 18094444
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Entry
18094444 CDS
T01077
Name
(RefSeq) meiotic recombination protein SPO11-2 isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18094444
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
18094444
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Ortholog
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GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
DUF7281
Motif
Other DBs
NCBI-GeneID:
18094444
NCBI-ProteinID:
XP_024449776
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All DBs
Position
1:7889161..7891649
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AA seq
375 aa
AA seq
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MRFFADREICYADILPPSEVRARIEVAVLNFLKILTCTDPAISDLLLINRKSSNRRVSQG
LLTDDDTWIFLSRSFCKRTLMRANAAKAFIRVWKVMEMCFKILSQEKRVTQRELFYKLLC
VSPDCFSSQLQVNRTIQDVVGLLRCSRYSLGIMASSRGIVAGRLLLQEPDKEVVDCSECG
SSGYAISGDLDLLDRLVMKTDARYIIIVEKHAIFQRLAEDRLFNHIPSILITAKGYPDIA
TRFLLHRMSRTFPELPIMALVDWNPAGLAILCTFKFGSIGMGLEAYRYACNVKWLGLRGD
DLQLLPEESLVSLKPRDLQIAKSLMSSETLQEKHREELALMVQSGKRAEIEALYFHGYDY
LGKYIAKKIVQANYI
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgagattcttcgccgatcgagaaatatgttacgccgatatcctccctccttcagaggtt
cgagcgagaatcgaagtagcggtgctcaattttctcaagatattgacttgtactgatccg
gcaatatcagacctccttctgataaatagaaaatcgagtaataggcgagtaagtcaagga
ctattgacggatgatgatacgtggattttcctctcccgttcattttgtaaaaggacttta
atgagagcaaacgcggctaaagcatttattagagtgtggaaggtgatggagatgtgcttt
aagattttgtcacaagaaaagcgggtaacgcagcgtgagctgttttataagctgctttgt
gtttcgcccgattgtttctcgtctcaattgcaggttaatcggacaatccaagatgttgta
ggtttgcttcggtgcagtcgttatagtcttggaatcatggcatccagtagaggaattgtt
gctggccgtttgttgttgcaggagccagacaaagaggtagtggactgttctgaatgtgga
tcttctgggtatgcaatttctggagacttggatttattggacagattggttatgaagaca
gatgcccggtacattattattgtggagaagcatgcaatattccagcgattggctgaggat
cgcttattcaatcacattccaagcattctcattacagccaaaggatacccagatatagcc
acaaggtttcttcttcaccgaatgagccggacttttcctgagttgccaattatggcactg
gttgactggaatccagctggattagctatactatgcaccttcaagttcggaagcatagga
atgggtctcgaggcttacagatatgcatgcaatgtgaagtggctgggactgcgaggggac
gatcttcagctactacctgaagaatctttagtctcattgaagccaagagatttgcagatt
gctaaaagtttgatgtcctcagaaactttgcaggagaaacatagagaagaattggcattg
atggttcagagtggcaaaagagcagaaatcgaagctttatacttccatggatacgattat
ctggggaagtacatagctaagaaaatcgtgcaagcaaactacatttaa
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