Populus trichocarpa (black cottonwood): 18094463 Help Entry 18094463          CDS       T01077                                  Name (RefSeq) vacuolar sorting protein 3   KO K20177   vacuolar protein sorting-associated protein 3 Organism pop  Populus trichocarpa (black cottonwood) Pathway pop04148   Efferocytosis Brite KEGG Orthology (KO) [BR:pop00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     18094463  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pop04131]     18094463 Membrane trafficking [BR:pop04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     18094463 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  zf-Vps39_C Clathrin Vps39_1 CNH TPR_Vps41 EAD11 TPR_PEP5_VPS11 Motif Other DBs NCBI-GeneID:  18094463 NCBI-ProteinID:  XP_006368804 UniProt:  U5GP59 LinkDB All DBs Position 1:complement(6480648..6488729) Genome browser AA seq 1004 aa AA seqDB search MADPTTTRIVLEPSFTFDLTIHSHTSIKSIAISPFSTNSQCFIYLGTSSGSLLLLSTYPE NPNDKTPTKDPKSTLDFDVSFRDVSLLKSVSFGDSPLDTVLLLDEIGKVVVLCDGFLFLT DSGLVQPVKKLGFLKGVSFITKRIKSSELECSDLFSDSSLEGSSASSRILSRLGGGVRAN GVKGKDFGQKSEGDYVFAAVIGTKMILIELRVGKNDKEVDFTVLKEMQCIDGVKTIVWIN DSIIVGTVNGYSLFSCVTGQSGVIFTMPDGSSLPLLKLLRKEKKVLLLVDNVGIVVDAHG QPVGGSLVFRKGPDSVGELASYVVVVRDGKMELYHKKSGSLVQTVSFGSEGVGPCIVADE ESGNGTLVAVATPTKVICYRRVPTEEQIKDLLRKKNFKEAISMVEELESNGEMSNEMLSF VHAQVGFLLLFDLHFEEAVNHFLQSETMQPSEVFPFIMRDPNRWSLLIPRNRYWGLHPPP APLEDVVDDGLMAIQRAIFLKKAGVDTTVNENFLLNPPTRADLLELAIKNMSRYLEVSRE KELTSSVREGVDTLLLYLYRALNRVNDMEKLASSGNSCLVEELETLLDESGHLRTLAFLY ASKGMSSKALAIWRILARNYSSGLWKDPAMEHELPDGNTNIISGREIAATEASKILAELS DQDLVLQHLGWIADVNPVLAVQVLTSEKRVNQLSPDEVIAAIDPKKVEIFQRYLQWLIED QDSCDAQFHTLYALSLAKSTVETFEVESTSQDPDDGRLEETKISDFGRNSIFQSPVRERL QIFLQSSDLYDPEEVLDLIEESELWLEKAILYRKLGQETLVLQILALKLEDSEAAEQYCA EIGRPDAYMQLLDMYLDPQNGKEPMFNAAVRLLHNHGESLDPLQVLETLSPDMPLQLASD TILRMLRARLHHHRQGQIVHNLSRALDVDAKLARLEERSRHVQINDESVCDSCHARLGTK LFAMYPDDTVVCYKCFRRLGESTSVTGRDFKRDPLFKPGWLVNR NT seq 3015 nt NT seq  +upstreamnt  +downstreamnt atggccgatcccaccaccacccgaatagtccttgaaccatcattcaccttcgacctcacc attcactctcacacttccataaaatccattgcaatttcaccattctcaacgaattctcaa tgtttcatttacctaggcacttcatctggttcccttctcctgctttccacatacccagaa aacccaaatgacaaaacccccaccaaagacccgaaatcgacactggattttgatgtttcg tttcgagacgtttcgttgttaaaatcagtttcttttggtgactcgccgttagacacggtt ctcttgcttgatgagattggaaaggttgttgttctctgtgatggttttttgtttttgacg gattcgggtttggttcaacccgttaagaaactggggtttttgaaaggggtttctttcatc actaagagaattaagagtagtgaattggagtgtagtgatttattcagtgatagtagtttg gagggttcaagtgcaagttctcgaattttgagcagattaggaggcggggttagagctaat ggggttaaaggtaaagattttgggcaaaaaagtgagggtgattatgtttttgctgctgtg attgggacaaaaatgattttaatagagcttagagttggtaagaatgacaaggaggttgat tttacggttttgaaagaaatgcagtgtattgatggggttaagacaatagtgtggatcaat gattccataattgttggcacggttaatgggtatagtttgttttcgtgtgttacaggccaa agtggggtgatttttacaatgcctgacgggtctagtttgccattgcttaagttgttgcgg aaagaaaagaaggtgttgttgttggtggataatgttgggattgttgttgatgcccatggg cagccagttggaggaagtttggtatttcgtaagggtccagattctgttggggagttggct tcttatgtagtggtagtgagggacgggaagatggagttgtatcataagaaatcaggtagc cttgtacagactgttagttttggcagtgaaggagttgggccatgtattgttgcagacgag gaaagtgggaatgggacacttgttgctgttgcaacgcccaccaaggttatttgctaccgg agagtacctactgaagaacaaatcaaagatttactgagaaagaaaaattttaaggaagca atctccatggtggaggagcttgagagcaatggtgaaatgtctaatgaaatgctatccttt gttcatgctcaagtggggttcctgctgctttttgacttgcattttgaggaagctgttaat cactttctacaatccgagacaatgcaaccttctgaagtgtttccatttataatgcgagat ccaaatcgctggtcgctgctgattcctaggaaccgatattggggtttgcaccccccccct gctcctcttgaagatgttgttgatgatgggttgatggctatccaaagagctattttcctt aaaaaagcaggtgtggatactacagtcaatgaaaattttctcttgaatccaccaactaga gctgatttacttgagttggcaataaaaaatatgagcagatatcttgaggtttctcgtgaa aaagaattgacttcttcagtaagagagggagttgacacacttctattgtacctctataga gccctaaaccgtgtcaatgatatggaaaagcttgcatcttctggaaacagctgtcttgtg gaggagttagaaactctgttagatgaatctgggcatttacggacgctcgccttcttatat gcaagtaaagggatgagctcaaaggctcttgccatatggcgtattttggcaagaaattat tcttctggtctatggaaagatcctgctatggagcatgaattaccggatggcaatacaaat attatctcaggcagagagatcgcagcaactgaggcatcgaaaattcttgcggagctgtct gatcaggatttggttttgcaacatcttggttggattgcagatgttaacccagtactcgca gttcaagttttgacatcagagaaaagagtaaatcagctttcaccagatgaagttattgct gccattgatccaaaaaaggttgaaattttccaaaggtatctccagtggttgatcgaagat caagactcctgtgacgcacaattccacacactgtatgcactctcacttgcaaagtcaaca gttgaaacctttgaggtggaaagtacctcccaggaccctgatgatggaaggctagaggaa acaaaaatttctgattttggaagaaactcaatctttcaaagtcctgtacgagaaaggttg cagatatttttacagtcatcagacttgtatgatccggaagaggttcttgacttgattgag gaatcagagctatggctggaaaaggctattctatacagaaaattagggcaagagactttg gtgctacaaattttggccttgaagctggaggatagtgaagctgctgaacaatattgtgca gagattggcagaccagatgcctatatgcagttacttgatatgtatttggatccacaaaat ggtaaagagcccatgtttaatgctgctgttagacttctgcataatcatggagaatcattg gatcctttgcaagttctagagacattgtccccggacatgcccctccaacttgcctcagat acgatactaagaatgttgagggctcgacttcaccatcatcgccaaggacaaattgtgcat aatctgtcccgtgctctagatgttgatgcaaaacttgcaagattggaggaaagatcacga cacgttcagataaatgatgagagtgtctgtgattcttgtcatgcccgtctaggaactaaa ctgtttgcaatgtaccctgatgacactgttgtctgttacaagtgtttccgtcgtcttgga gagtccacttctgtcacaggtcgtgacttcaagcgagatcctttgttcaagccaggttgg cttgttaaccgctga

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