Populus trichocarpa (black cottonwood): 18094527
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Entry
18094527 CDS
T01077
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
18094527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18094527
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
18094527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
ABC_trans_N
AAA_16
AAA_25
AAA
AAA_28
DO-GTPase2
RsgA_GTPase
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
18094527
NCBI-ProteinID:
XP_024460925
LinkDB
All DBs
Position
1:3627861..3635405
Genome browser
AA seq
1449 aa
AA seq
DB search
MESADIYRASSSLRDSFRAGSSAWRNTTVEAFSRSSREEDDEEALKWAAIEKLPTYDRLR
KGILTSASKGVANEVDIEKLGLQERKQLLERLVKVAEEDNEKFLWKLKDRVERVGIDVPT
IEVRYDNLNIEAEAYVGSSALPSFAKFTFNIIEGLLISLNILRNRKKPLTILKDVSGIVK
PSRLTLLLGPPSSGKTTLLLALAGKLDPNLKFSGRVTYNGHEMNEFVPQRTAAYISQHDV
HIGEMTVRETLAFSARCQGAGYLHDMLAELSRREKEANIKPDPDVDVFMKAVASQGDEAN
VITDYVLKILGLEICADTMVGDEMIRGISGGQRKRVTTGEMLVGPSRALFMDEISTGLDS
STTYQIVNSLRHTVHILNCTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRERVLEFF
EHMGFKCPERKGVADFLQEVTSRKDQEQYWARKDQPYRFITANEFAEAFQSFTVGRRTAE
ELSIPFDKSKNHPAALVTKTHGAGKKDLLKANFSREYLLMKRNSFVYIFKICQLTIMALI
SMTLFFRTKMHRDTVRHGGIYTGALFFTAIMIMFNGMSELSMTIAKLPVFYKQRDLRFFP
SWAYAFPQWILKIPVSFVEVAAWVFLTYYVIGFDPNVERLFKQYLVLLLINQTASALFRF
IAAAGRNMIIANTFGSFALLTLFTLGGFILSREKIKKWWIWGYWSSPLMYGQTAILVNEF
LGNSWSHVPENSTEPLGIQVLKSRGFFTEAYWYWIGAGATIGFILLLNLFFVLALTFLNA
FDKPQAFISEEPESDESGRKTERAIQLSNHGSSHGTNTEGGVGISRASSEVIGGVSNNRK
KGMVLPFEPHSITFDDIIYSVDMPQEMKVQGVVQDRLVLLNGVNGAFRPGVLTALMGVSG
AGKTTLMDVLAGRKTGGYIDGEIKISGYPKKQETFARVSGYCEQNDIHSPQVTVYESLLY
SAWLRLPPEVDSETRRMFIEEVMDLVELNPLRHALIGLPGVNGLSTEQRKRLTIAVELVA
NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG
GQEIYVGPLGRHSTHLIKYFEAIEGVSKIKDGYNPATWMLEISSSAQEMALEVDFSNIYK
NSDLFRRNKALIVELSTPAPGSTDLYFPTKYSTSFLTQCMACLWKQHWSYWRNPPYTAVR
FIFTTFIALMFGTMFWDLGSKVSSTQDLSNAMGSMYAAVLFLGVQNASSVQPVVAVERTV
FYRERAAGMYSALPYAFAQVLIELPYIFAQAAVYGIIVYAMIGFDWTVAKFFWYLFFMYF
TLLYFTYYGMMAVAVTPNHHIASIVSSAFYGIWNLFSGFIVPRPSIPIWWRWYSWACPVA
WTLYGLVVSQFGDIQKKLTETQTVKEYVKDYFGFHHDFLGVVAAAIVGWTVLFAFIFAFA
IKAFNFQRR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgctgatatttatagagctagtagtagtttaagagatagtttcagagcaggt
tcttcagcgtggagaaacactacggtggaagcattttctagatcttcaagagaagaagat
gatgaagaggctctaaaatgggctgcaattgagaaacttcccacttatgatcgattaaga
aaaggtatattaactagtgcatcgaaaggtgtagctaatgaagtagatattgaaaagctt
ggactccaagagagaaaacagttgcttgagaggttggtcaaagttgcagaagaggataac
gagaagttcttgtggaagctcaaggaccgtgttgaaagggttggcattgatgttccaaca
attgaagttcggtacgataatctaaatatcgaagcagaagcatatgtagggagtagtgct
ttgccttcatttgctaagttcacttttaatataatagagggtttattgatttctcttaat
atccttcgaaatagaaagaaaccactcaccatccttaaggatgttagcggaatcgtcaag
ccatcaagattgactttgcttttgggtcctccaagttctgggaagaccacactgttgttg
gcattggctgggaaacttgatcctaatctgaagttttctggtcgtgtgacttataatggt
catgagatgaatgagtttgtaccacaaagaacagcagcctatatcagtcaacatgatgtc
cacataggagaaatgaccgtaagggaaactttggcgttctctgccaggtgccaaggggct
ggatacttgcatgacatgttggcggagttgtccagaagagagaaagaagccaacattaag
cctgatcctgatgttgatgtcttcatgaaggcagtagcatcacaaggtgatgaggccaat
gtcatcaccgactatgtcttaaagatattaggattggaaatctgcgcagacactatggta
ggtgatgaaatgataaggggtatctctggaggacaaaggaagcgtgttacaactggtgaa
atgctggttggaccatcaagggcattgtttatggatgagatttctactggcttggacagc
tcaacaacttaccaaattgtgaactcattaaggcataccgttcacattctcaattgcacc
gctgtcatctcacttctccagccagcacctgagacttatgatctctttgatgacattatt
ctcctttcagatggccaaattgtgtaccaggggcctcgtgaacgtgtgcttgaatttttt
gaacatatgggcttcaagtgccctgaaagaaaaggcgtggctgactttttgcaagaagtg
acatcaaggaaagatcaagagcagtactgggcacgaaaagatcagccttacaggtttatc
acagccaacgaatttgctgaggcttttcaatcgttcactgtgggacggaggactgcagag
gagctttcaataccgtttgacaagtccaagaaccatccagctgctttggtaaccaaaact
catggagctggaaagaaagatctgcttaaagctaacttctctagagaatacttgctcatg
aagaggaactcatttgtctacatcttcaagatttgccaacttacaataatggcactcatt
tcaatgacactcttctttcggaccaagatgcatcgagatacagtcaggcatggtggaatt
tatactggtgctctgttcttcactgcaatcatgatcatgtttaatggtatgtcagagcta
tccatgaccatcgcaaagcttcctgtgttttacaagcaaagagaccttcgattctttcct
tcatgggcatatgcatttcctcaatggatcctgaaaattcccgtatcatttgttgaagtt
gctgcatgggtgttcctaacctattatgtgattggatttgatcctaatgttgaaaggctt
tttaagcagtacctcgtgcttttgctaattaatcagacggcatctgcattatttcgattt
atcgctgcagctggaaggaacatgattattgctaacacctttgggtcatttgcgctactt
acactttttacattgggtggcttcatcttgtcacgagagaaaataaagaaatggtggata
tggggttactggagttcaccattgatgtatgggcagacggcaatactagtgaatgagttc
cttggaaatagttggagtcatgttcctgaaaactccacagaaccactaggaatacaagtt
ttgaagagtcgtgggttcttcacagaagcatattggtattggataggagcaggggcaaca
ataggattcatattactattaaatctcttcttcgtactggctctcactttcctcaatgca
tttgataagcctcaggcttttatatctgaagagcctgaaagtgatgaatctggtcgcaaa
accgaacgagctattcagttatcaaaccatggaagtagtcacggaacaaacacagagggt
ggagttggaattagcagagctagttcagaggtcattggtggggtcagcaataacaggaag
aaaggaatggtccttccatttgaaccacattccatcacatttgatgacattatttactcc
gttgacatgccacaggaaatgaaagttcaaggagttgttcaagatagattggtgcttttg
aatggtgtgaatggagctttcaggccaggtgtccttacagctttgatgggtgttagtggt
gctggaaaaacaactttgatggatgtgttagctggtaggaaaactggtggatatattgac
ggagaaatcaaaatttcagggtacccaaagaagcaagaaacttttgctagagtttctgga
tactgtgagcaaaatgacattcactctccacaagttactgtttatgaatccttactctac
tcagcttggcttcgtctaccacctgaagttgactctgaaaccagaaggatgttcattgag
gaagtcatggatcttgtggagttgaatccattgcgccatgcattaatagggttgcctggt
gtgaatggtttgtccaccgagcagcgcaagcggctaaccattgcagttgagctagttgca
aacccctctatcatattcatggatgagccaacttcagggctagatgcaagagctgctgca
attgtgatgagaacagttaggaacactgtggacacaggaagaacagttgtatgcaccatc
catcagcccagtattgacatatttgaagcttttgatgagctattcctgatgaagcgagga
ggacaagagatatatgtggggcctctgggtcgccattctacccatctaataaaatatttt
gaggcaattgaaggagtcagcaaaattaaagatggttataatccagcaacttggatgctg
gaaatttctagttcagcacaagaaatggctttggaggttgatttttctaacatttacaag
aattcagatctgttcaggagaaacaaagcactcattgtggaattaagcacacctgctcct
ggctcgacagacctttatttccctacaaagtactcaacatcatttctcacacaatgtatg
gcttgcttatggaagcaacattggtcatattggaggaatccaccatacactgccgtgaga
tttattttcacaacctttatagccttgatgtttgggacaatgttctgggaccttggctcc
aaagtgagtagtacccaggatctttccaatgcaatgggttcgatgtatgcagctgttctt
ttccttggtgtccaaaacgcatcatccgtgcagccagtggtggctgttgaaagaaccgtc
ttctacagagaaagagctgctggaatgtattcagctttgccatatgcctttgcacaggtc
ctgatcgagcttccgtatatttttgctcaagctgcagtctatggcattatagtttatgcg
atgattggatttgattggactgttgcgaagttcttctggtacctgttctttatgtacttc
acattattatacttcacctactacggaatgatggctgttgcagtgactccaaaccaccac
attgcttccatagtttcctctgcattttatggaatatggaacctattctcagggtttata
gttcctcggcccagcatacctatatggtggagatggtactcctgggcttgtccagtagca
tggaccttgtatggattggttgtatcacagtttggagatatacagaaaaaacttaccgaa
actcaaacagtgaaagaatatgtgaaggattattttggtttccaccatgattttcttgga
gtagtcgcagcggcaattgttgggtggactgtcctctttgctttcatatttgcctttgct
atcaaggctttcaacttccagaggcgatag
DBGET
integrated database retrieval system
