Populus trichocarpa (black cottonwood): 18094574
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Entry
18094574 CDS
T01077
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
18094574
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
18094574
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
18094574
NCBI-ProteinID:
XP_006368965
UniProt:
B9MUT6
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All DBs
Position
1:complement(12806496..12810491)
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AA seq
374 aa
AA seq
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MASANPFDILGDDDNNEDLSQLIAAAQLKAAEKPKKADKSAAAPASQPAKLPTKPAPPAQ
AVREAKNEGGRGGGRGDGRGYGRGRGRGGGGGGGGRFNRESNNNETPFIGNGFSGGSRPS
EDGEAGRTSERRGYGAPRGGFRGGRRGGYSNGEAGEGERPRRQYDRHSGTGRGNELKREG
SGRGNWGTPADEIAPETEEPVVDNEKSVITEKQPEEEDAAAASKDAADASKDAAVNEPEE
KEPEDKEMTLEEYEKVLEEKRKALLSLKAEERKVGLDKDLQSMQQLSSKKSNDEIFIKLG
SEKDKRKDAADKEDRAKKAVSINEFLKPAGGDRYYNPGRGRGRGRGRGGYGGNTRDVEAP
SIEDPGQFPTLGGK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagcgaacccttttgatatccttggcgacgatgacaacaatgaggacctttct
caactcatcgccgctgctcagcttaaggcggccgagaagcccaagaaggcggataagtcc
gctgctgctcctgcttctcagcctgctaagcttcccaccaagcctgctccccctgcacaa
gctgtgagggaggcaaagaatgaaggtggacgtggaggaggccgtggagatgggcgtggc
tatgggcgtgggcgtggtcgcggtggcggtggcggtggcggtggcagatttaacagagaa
tcaaataacaatgaaacgcccttcattggcaatggtttttctggaggatccagaccatct
gaagatggagaggctgggagaacttctgagaggcgtggctatggtgcccctcgtggtggt
ttccgcggtggtcgccgtggtggttatagcaatggggaagctggagaaggtgaacgccct
cgaaggcagtatgatcgccacagcggtaccggtcgtgggaatgagcttaaacgcgaaggg
tctggccgtggtaactggggaactcctgctgatgaaattgctccagagactgaggaacct
gttgttgacaacgagaagagcgtcattactgagaagcagccagaagaggaggatgctgca
gctgccagcaaggatgctgcagatgccagcaaggatgctgctgtgaatgagccagaagag
aaggagcctgaggacaaggagatgacactggaagagtatgagaaggttcttgaagagaag
aggaaggctttgctttctctgaaggctgaggagaggaaagttggcttggacaaagactta
cagtccatgcaacagctgtcaagtaagaagagcaatgatgaaatttttatcaagctgggt
tctgagaaggacaaacgaaaagatgctgctgacaaagaagacagagccaagaaggctgtc
agcataaatgaattcctgaagcctgctggaggtgacaggtactacaaccctggtcgaggc
cgaggccgtggccgtggaaggggtggatatggaggcaatactcgtgatgtggaagctccc
tctattgaagaccctgggcagttccccaccttgggtggcaagtga
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