Populus trichocarpa (black cottonwood): 18094759
Help
Entry
18094759 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18094759 isoform X1
KO
K17925
sorting nexin-13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pop04990
]
18094759
Domain-containing proteins not elsewhere classified [BR:
pop04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
18094759
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
18094759
NCBI-ProteinID:
XP_006369185
LinkDB
All DBs
Position
1:16176916..16185532
Genome browser
AA seq
1144 aa
AA seq
DB search
MSTQRQVIVRDLMDEGKKRIVVLVICVVGLSYLMSLTSSSVWVNLPAAASLIILLRYFTM
DYEMRKKAAAYNNKPASAKSSTLPQNKSLELTRVVEKSDWRRKVNSPVVEDAIDHLTRHL
VSEWVADLWYSRLTPDKEGPEELVQLMNGVLGEFSSRMRNVNLIDLLTRDLINLICTHLE
LFRASQAKIEKQQSGLITIDQRDKELRLVLHAENKLHPALFSAEAEHKVLQHLMDGLISF
TFKPADLQCSFFRYVVRELLACAVMRPVLNLASPRFINERIENVIISKANQRVAAAQEAS
HSKPNGSSRISSDHFSRFLDPTGTGVELTQLKTNQSRSGPEAPEKDKVNGSHISKDPLLS
IDTPSSRTWSSLSKNSQINNEGEIERHLSGREWGEMFDMMSRRKTAALAPENFENMWTKG
RNYRKKEGENQSIKHASQNSSASKSNTSDYSKSTSNSKKDDVTKLDASLAHNDQSVGTEQ
STVENPLHHVNQNMSNPSLFSSHRDGIQSLMHVDGTESGSTSSYTSEEEDVNFVTGLDSP
GTKVWDGKTNRNQAVSHIHHPLENPDGHRAKKTGRGHAHYQRLSRPQSGRKRSRPSTQKV
PVWQEIERTSFLSGDGQDILSLKGHAKADDFTDDSEVESLDRVYSGSTACSSAPSVSIPE
SHTLNDNSLKHSLMVDAFYKLRCEVLGANIVKSDSKTFAVYSLSVTDVNNNSWSIKRRFR
HFEELHRRLKEYPEYSLHLPPKHFLSTGLDMPVIKERCKLLDRYLKRLLQLPTISGSIEV
WDFLSVDSQTYVFSNSFSIIETLSGDLDDKPSEKSKRVSNFIGPATDSLSTRNKIKTEQL
SAECKESILQTKHALGVDGARMISKDTPQSPERKSVKEFGKSFKDPGCDSDTQKNASSAR
NLEKNIKGREGDSLEEMSASLNDSANDPMLPTEWAPPNLTVPILDLIDVIFQLQDGGWIR
RQAFWVAKQILQLGMGDALDDWLIEKIQLLRRGSVVASGIKRVEQILWPDGIFITKHPKR
RPPPHQPSEVSSPKFISPHGQQPMEVSSPKFSNEQQQQDAARRAKLVYELMIDNAPAAIV
SLVGRKEYEQCAKDLYFFLQSSVCMKQLAFDLLELLLLTAFPELDYVFRQLHEEKHKFGE
FKPN
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcaaaggcaggtgatcgtacgggacttaatggatgaaggcaagaagaggatt
gttgttttggttatttgtgttgttggattatcttatctcatgtctttaacgagctcctca
gtttgggtcaacttgcctgctgctgcttccttgatcattctccttcgctacttcaccatg
gattatgaaatgcgtaagaaagctgctgcatataacaacaaacctgcctctgcaaaatca
agtacactgccacaaaacaaatctcttgaacttaccagggtagttgaaaagtctgactgg
agaaggaaagtgaattctcctgttgttgaggatgcaatagatcacttaacaagacatcta
gtctctgagtgggtggcagatctatggtactctcgcctgacccctgataaggaaggtcca
gaggaactggtgcagctaatgaatggtgttcttggggaattttcaagtcgcatgagaaat
gtaaatcttattgatctactgacaagggatcttattaatctcatctgcacccatttggag
ctttttcgtgcaagtcaagcaaagattgaaaagcaacagtctggtttgattaccattgat
cagcgagacaaggaactaagacttgttctgcatgctgagaacaaattgcaccctgcttta
ttttctgctgaagctgagcacaaggttttgcagcatctgatggatggcctcatttctttc
actttcaagccagcagatctgcagtgctctttcttccgttatgttgtcagggaacttctc
gcttgtgcggtgatgcgaccagtgttaaacttggctagcccaaggttcataaacgaaagg
attgaaaatgttatcatttctaaggctaatcaaagagttgctgcagcacaagaagcatct
cattccaaaccaaatgggtcttcaaggatctcatccgatcatttttctaggtttttagac
cctactggaactggggttgaacttacgcagttaaaaaccaatcaatccagaagtgggcca
gaggcacctgaaaaagataaggtgaatggaagccatatctcaaaagatccattgctttcc
atcgataccccatcttcccgcacatggagctcactgtccaaaaactcccagattaataat
gaaggagaaattgaacgacatctttcaggacgtgaatggggtgagatgtttgatatgatg
tctcgcagaaagactgctgcccttgctccagaaaattttgaaaacatgtggacaaaaggg
agaaactatagaaagaaagaaggtgaaaatcagtcgatcaagcacgcctcacagaattct
tcagcaagtaagtccaatacatcagattattcaaagagtacgtcgaattccaagaaggat
gatgtaaccaaactcgatgcttcgctggcccacaatgatcagtctgtgggtactgagcag
tctactgtagaaaaccctctgcatcatgtcaatcagaacatgtcaaatccctcactattt
agttcacaccgagatggcatacagagcctcatgcatgtggatgggactgaatcaggcagc
actagctcttatacttctgaagaggaagatgtgaactttgtaactggtcttgattctcca
ggaactaaagtctgggatggtaaaactaacagaaaccaggctgtttcccacattcatcat
ccgcttgaaaatcctgatggccacagggcaaagaagactggtagagggcatgctcactat
caaagattatctagaccccaatctggcaggaaaaggtcgaggccaagcactcagaaggta
cctgtttggcaagagattgagagaacaagcttcttgtctggggatgggcaggacatactt
agtttaaaaggacatgctaaagctgatgatttcactgatgattccgaggttgaaagtctg
gatagagtttacagtggatcaactgcttgttcgtctgcaccatctgtttctattcctgaa
agccacactttaaatgataattccttgaaacattcattaatggtggacgcattttataag
ttgagatgtgaggtattgggtgcaaatattgttaagagtgactctaaaacgtttgctgtt
tattccttatctgttacagatgtaaataacaatagttggtcaatcaaaagaaggtttcga
cattttgaggagttacatagacggctcaaagaatatccggaatatagtcttcatttgccg
ccaaagcattttctctctacaggtttagatatgcctgtcataaaagagcggtgtaaattg
cttgacagatatctgaagaggctcttgcaacttccaacaatttcaggatctattgaagtc
tgggactttcttagcgttgattctcagacgtatgtgttctcaaattcattttctatcatc
gaaacattatcaggtgacctggatgataagccctctgaaaagagtaaaagggtttcaaat
tttatcgggcctgcaaccgattccttatccactaggaataagattaaaacggaacaattg
agtgcagagtgcaaggaatctatattgcagacaaagcatgctcttggggtagatggagca
cgaatgatttcaaaagacacacctcaatctccagagagaaagtctgtcaaagaatttgga
aaatcattcaaggatccaggctgtgattcagatacgcaaaagaatgcatcatctgccaga
aatttagagaagaatataaaaggaagagagggcgatagtttagaagagatgtccgcatcc
cttaatgattctgctaatgaccccatgctccctacagagtgggcaccaccaaatttgact
gttcctatacttgatttgatagatgtcattttccagctacaagatggtggatggatcagg
aggcaggctttttgggtggccaaacagatactacaactaggaatgggtgatgctttagat
gattggttgatagagaaaatccagcttctgcgtaggggttcagttgttgcatcggggatc
aagcgggttgagcagatactttggcctgatggaatattcataaccaaacatccaaagaga
cgaccgccaccccatcaaccctcagaagtgtcttctcctaaattcatttcccctcatggc
cagcaacccatggaagtatcttcacctaaatttagtaatgagcagcaacaacaggatgca
gctcgacgtgctaaacttgtatatgagctgatgattgacaatgcaccagctgccattgta
agtcttgttggtcgaaaggagtatgaacaatgtgcaaaagatctctatttctttcttcag
tcatctgtttgtatgaaacaactggcgtttgacctccttgagctgctgcttttgactgca
tttccagaactggattatgttttcaggcagctgcatgaagaaaagcataaatttggtgaa
tttaaacccaattaa
DBGET
integrated database retrieval system
