Populus trichocarpa (black cottonwood): 18094831
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Entry
18094831 CDS
T01077
Name
(RefSeq) eukaryotic initiation factor 4A-8
KO
K03257
translation initiation factor 4A
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
18094831
03012 Translation factors [BR:
pop03012
]
18094831
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18094831
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
18094831
mRNA cycle factors
Stress granule specific factors
18094831
Translation factors [BR:
pop03012
]
Eukaryotic type
Initiation factors
eIF-4
18094831
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18094831
Exosomal proteins of bladder cancer cells
18094831
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
18094831
NCBI-ProteinID:
XP_006369264
UniProt:
A9PA53
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All DBs
Position
1:complement(19443195..19447265)
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AA seq
413 aa
AA seq
DB search
MAGLAPEGSQYDAKQYDAKMNDLLANDGQDFFTMYEEVFETFDSMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRQ
DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
GRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTSDDDRMLFDIQKFYNVVVEELPSNVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtctggcaccagaaggatcgcaatatgatgctaagcaatatgatgccaaaatg
aatgatctgcttgcaaatgatgggcaagatttcttcacaatgtatgaggaggtttttgaa
acctttgattcgatgggattgcaagagaaccttctgaggggcatctatgcctatggtttt
gagaagccatctgcaatccagcaaagaggaattgttccattttgtaaaggccttgatgtg
attcagcaggcacaatctggaactgggaaaacagcaactttctgttctggcattctccag
caacttgattatggtctggtgcaatgtcaagcattggtcctggctcccaccagggaacta
gcacaacagattgaaaaggttatgcgagcacttggtgattatcttggtgtcaaagttcat
gcttgtgttggtggcacaagtgttcgtgaggaccaacgcattcttcaagctggtgttcat
gttgttgttggcacacctggtcgtgtgtttgacatgttgagaaggcagtcacttcgacaa
gattacattaaaatgtttgtcttggatgaggctgatgaaatgctttcacgtggttttaag
gatcagatctatgatattttccagttgctgccatcaaaagttcaagttggtgtgttctcc
gctactatgccacctgaagctcttgagatcacaaggaagttcatgaacaagcctgtgagg
atcttggttaagcgtgatgagcttactcttgaaggtatcaagcaattttatgttaatgtc
gataaggaggagtggaagctcgaaacactatgtgatctatatgagaccctagccatcact
cagagtgtcatttttgttaacacccggcgcaaggttgactggctgacagacaagatgcga
ggccgtgatcacacagtctcggctactcatggagatatggaccagaacactcgtgatatc
attatgcgagaattcaggtccggctcttctcgtgttctcatcactaccgacctcttggct
cgtggtattgatgttcagcaagtttcccttgtcataaattatgatctgccgactcaacct
gaaaactatcttcaccgtattggacgaagtggacggtttggaagaaagggtgttgctatt
aactttgtgacaagtgatgatgacagaatgctgtttgatatccagaagttctataatgtg
gtcgtcgaggagctgccatcgaatgtggccgatctcctttga
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