Populus trichocarpa (black cottonwood): 18094847
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Entry
18094847 CDS
T01077
Name
(RefSeq) myosin-17
KO
K10357
myosin V
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
18094847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
18094847
04131 Membrane trafficking [BR:
pop04131
]
18094847
03029 Mitochondrial biogenesis [BR:
pop03029
]
18094847
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
18094847
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
18094847
mRNA cycle factors
P-body specific factors
18094847
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Myosins
18094847
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
18094847
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
18094847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
DUF4201
TSC22
AAA_16
nSTAND3
AAA_22
CbiA
DUF3847
XhlA
Motif
Other DBs
NCBI-GeneID:
18094847
NCBI-ProteinID:
XP_006369283
LinkDB
All DBs
Position
1:19648754..19664344
Genome browser
AA seq
1530 aa
AA seq
DB search
MAAPDNIIVGSHVWVEDPVLAWIDGEVTRINGNVVHVNTANGKKVVSNISKVFPKDTEAP
PGGVDDMTKLSYLHEPGVLQNLAARYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQY
KGATFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLE
RSRVCQISDPERNYHCFYLLCAAPLEDIERYKLGSPKSFHYLNQSNCYELDGVNDSHEYL
ATRRAMDIVGISDQEQEGIFRVVAAILHLGNVNFAKGQEIDSSVIKDEKSRFHLSFTSEL
LRCDAKSLEDALIKRVMVTPEEIITRTLDPENAVSSRDALAKTIYSRLFDWLVDKINVSI
GQDLNSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNHKRFIKPKL
SRTDFTISHYAGEVNYQANQFLDKNKDYVVAEHQALLTASNCSFVAGLFPPLPEESSKSS
KFSSIGSRFKLQLQSLMETLSATEPHYIRCVKPNNILKPAIFENFNIIQQLRCGGVLEAI
RISCAGYPTRRTFYEFLNRFGLLAPEVLEGNSDDKVACQMILDKKGLIGYQIGKSKVFLR
AGQMAELDARRAEVLGNAARTIQRQIHTYIARKEFISLRETAINLQSYLRGNVARKLYEQ
LRREAAALKIEKNFRLYIARKSYLRVKSSAITLQTGLRAMTARKEFRFRKQTKATTIIQA
HWRCHQAHSYYRHLQKAIIVSQCGWRCRVARRELRMLKMAARETGALKEAKDKLEKRVEE
LTWRLQLEKRLRIDLEEAKAQEFAKLQDALHAMQVQVEEAKSMVVKEREAARKAIEEAPP
VIKGTPVMVQDTEKINSLSAEVEKLRAQLLSETQIADNEKQAYVVAQATNEQLTKKLEDA
EKKVDQLQDSVQRLEDKVSNLESENQVLRQQALAISPTAKALTARPKTTIIQRTPENGNV
QDGDAKKAADSILARSNSREAENEDRPQKSLNEKQQENQDLLIKCVSQDLGFSGGKPVAA
CMIYRCLIQWRSFEVERTSIFDSIIRTIGSAIEVQENNDVLSYWLSNSSTLLLLLQRTLK
ASGAASLTPQRRRSTSASLFGRMSQGLRGSPQNAGFSFLNGRVLSGLDELRQVEAKYPAL
LFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIA
HWQSIVKSLNNCLKTMRANYVPPFVVKKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYV
KAGLAELEQWCHDATEEFAGSAWDELKHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQ
QLYRISTMYWDDKYGTHSVSSDVISSMRVMMTEDSNNALSSSFLLDDDSSIPFTVDDISK
SMQKVEASDIDPPPLIRENSGFSFLLQRAE
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaccggacaatataattgttggttctcatgtatgggttgaagatcctgttctg
gcttggattgatggtgaagttactcgcataaatggcaatgtggtccatgttaataccgca
aatggaaaaaaggttgtctcaaacatatcaaaagtgtttccaaaggacacagaagcccct
cctggaggggtggatgacatgacgaagctttcatatctgcatgaacctggagttctgcaa
aatctagctgctagatatgaacttaatgaaatctatacatacactggcaatatcctgata
gcagttaatccatttcaaagattgcctcatctgtatgacactcacatgatggaacagtat
aaaggagcaacatttggggagctaagtcctcatgtttttgctgttggtgatgctgcatac
agggcaatgattaatgaaggaaaaagcaattcaattctggttagtggggagagtggtgct
ggtaaaacagagacgacaaagatgcttatgagatatcttgcctacctgggaggacgatct
ggagtagaaggaagaacagttgaacaacaagttctggagtccaacccagttcttgaagca
tttggcaatgcgaaaacagttaggaacaacaactcaagtcgttttggtaaatttgtggaa
atccaatttgacaagagtgggagaatatctggggctgctatcagaacttatctacttgaa
agatctcgtgtttgtcaaatttcagatcctgaaagaaactaccattgcttttaccttctt
tgtgctgcaccacttgaagatattgagagatacaaattgggaagcccaaaatctttccat
tatttaaatcaatcgaattgttatgagttggacggtgtaaatgattctcatgagtatctt
gcaacccgaagggctatggatatagttggaattagtgaccaagaacaggagggaattttt
agggttgtggctgcaattcttcatcttggaaatgttaattttgccaagggacaggagata
gattcctcagttattaaggatgaaaagtctagattccatctcagttttacttcagaactt
ctcaggtgtgatgcaaagagcttggaagatgccttaattaaacgtgtaatggttacacca
gaagaaattatcacaaggactcttgaccctgaaaatgcagtttctagcagggatgctttg
gcgaagacgatatattctcgcttgtttgactggcttgtggataaaattaatgtttcaatt
ggacaggatttaaactcaaaatcaataattggagtacttgacatctatggttttgaaagc
tttaagtgcaatagttttgagcagttctgcatcaatttcacaaatgaaaaactacagcaa
catttcaatcagcatgtgtttaaaatggagcaggaagagtacaccaaagaggagataaac
tggagctacattgagtttgttgataaccaggatgtattggacctaattgagaagaaacct
ggaggaataattgcgcttttagatgaagcctgcatgtttcccaagtctacacatgaaaca
tttgcgcaaaaattgtatcagacattcaaaaatcataaacgttttatcaaaccaaaactt
tcccgcactgatttcaccatatcacactatgcaggggaggtaaattatcaagccaatcaa
tttctggacaaaaacaaagattatgtggtggctgagcatcaagccctgttgactgcttca
aattgctcctttgtggcgggcctattcccaccacttccagaagaatcatcgaagtcatcc
aagttctcttccattggttcacgctttaagctacaacttcaatctttgatggagaccttg
agtgcaactgaaccccactacattcgatgtgtgaagccaaataacatcctgaagcctgct
atttttgagaatttcaacatcatccaacagttacgatgtggtggtgttcttgaggcaatt
aggattagctgcgctggatatccaaccaggcgaaccttttatgagtttcttaatcgtttt
ggattacttgctcctgaagttttggaaggaaactctgatgataaggttgcatgtcaaatg
attcttgataaaaagggactgataggataccagataggcaagtcaaaggtcttcttgaga
gcaggtcagatggctgagttggatgctaggagagcagaagtgcttggcaatgcagccaga
accattcaacggcaaattcacacttacattgcccgcaaggagttcatttcattgcgtgaa
actgctatcaatttgcaatcttatttaagaggtaatgtagcccgaaaactgtatgagcaa
ttgaggcgagaagctgcagctttgaagatcgagaagaatttccgtctctacattgccagg
aaatcctatttgagagtgaagtcatctgcaatcacattacagacaggcttaagggcaatg
acggcacgaaaagaatttagattccggaagcaaactaaagcgaccaccatcattcaggct
cattggcgttgccaccaagctcattcttattatagacatcttcagaaggcaataatagtt
tctcagtgtggttggagatgcagagttgcaagaagagagctcagaatgctcaaaatggct
gctagagagaccggggcacttaaagaagcaaaggataagctggaaaagcgtgtagaagaa
cttacatggcgtttgcaattggaaaagcgattaaggattgatcttgaggaggcaaaagcc
caagaatttgccaagttgcaggatgcattgcatgccatgcaagtacaggtagaagaagca
aagtctatggttgttaaagaacgagaggcagctcgaaaagccattgaagaagcacctcca
gtcattaagggaacgcctgtcatggttcaagacacagaaaaaatcaattcattgtcagct
gaagttgaaaagttgagggcacagttgctctcagaaacacaaattgctgacaatgaaaaa
caagcttatgttgttgctcaggccacaaatgagcaactaaccaagaagcttgaagatgct
gagaagaaagtggatcaactccaagattcagttcagagattagaagacaaggtgtctaat
ttagaatcagagaatcaagtacttcgtcaacaagcacttgctatatcaccaactgccaaa
gctttaactgcaagacctaagacaacaatcatccagaggaccccagagaatggtaatgtt
caagatggagatgcgaagaaagcagcggattcaatacttgcccgatctaattctcgggaa
gctgaaaatgaggataggccccagaaatctcttaatgagaaacagcaggagaaccaagac
ctgctaattaaatgcgtgtcacaagatttaggattcagtgggggcaaacctgttgctgct
tgtatgatatacagatgccttattcagtggaggtcatttgaagttgaaagaacaagtatt
tttgacagtatcattcgaacaataggttcagcaattgaggtccaagaaaacaatgatgta
ttgtcatattggttatcaaattcatccacactattattgctactacaacgcaccctaaaa
gcaagtggagcagcaagcttaactccacaaaggcgaagatcaacatcagcttcattgttt
ggaaggatgtcccaagggcttcgtggttcaccacaaaatgctgggttctcattccttaat
ggtcgggtgcttagtggactggatgaattgcgacaagttgaggctaaatatcctgctttg
cttttcaaacagcaattaacagctttccttgaaaagatatatgggatgattagagataac
ttaaagaaagagatttcccctttgcttggattgtgtatccaggctccccggacgtcacga
gcaagtttagtcaaggggcgctctcaagccaatgctgtagctcaacaagctctgattgca
cactggcaaagcatagtaaaaagtctaaataattgcctaaagactatgagagccaactat
gttcccccatttgtagtcaagaaagtgtttactcagatattttcatttatcaatgttcaa
ttatttaacagccttcttttgcggcgcgaatgctgctcattcagcaacggggaatatgta
aaagcagggttagctgagttggaacagtggtgccacgatgcaacagaggagtttgcaggc
tcagcatgggatgaattgaagcacattagacaagctgttggctttctggttatacatcag
aagcccaaaaagactctcaaagaaataactaatgatctttgcccggtgcttagcatacag
cagttatacaggatcagcactatgtactgggatgacaaatatggcacgcatagtgtatct
tcagatgtaatttcaagcatgagagttatgatgacggaggactcaaacaatgctttgagc
agttctttcttattggacgatgactcaagcattccattcacagtggatgacatttcgaag
tcaatgcaaaaagttgaagcttctgatattgaccctccacctctaatccgtgaaaactca
ggtttttcattcttgttacaacgtgcagaatga
DBGET
integrated database retrieval system
