Populus trichocarpa (black cottonwood): 18094858
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Entry
18094858 CDS
T01077
Name
(RefSeq) protein HOTHEAD
KO
K15403
fatty acid omega-hydroxy dehydrogenase [EC:1.1.-.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00073
Cutin, suberine and wax biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00073 Cutin, suberine and wax biosynthesis
18094858
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Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
NAD_binding_8
DAO
Lycopene_cycl
Pyr_redox_2
FAD_binding_2
Motif
Other DBs
NCBI-GeneID:
18094858
NCBI-ProteinID:
XP_006369296
UniProt:
U5GQK9
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Position
1:complement(20032487..20037108)
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AA seq
591 aa
AA seq
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MASSVANQLFLFFFLWLYTLSSSQAGHHYSEFRYPFIRKASSFPSSSSSFSSSGGGDHAY
DYIVVGGGTAGCPLAATLSQRFSVLLLERGGVPFANANVSFSKNFHIALADTSSTSASQY
FISTDGVLNARARVLGGGTCINAGFYTRASKRFIHKVGWDAKLVNKSYPWVEKQIVHRPK
VAPWQVVVRDSLLDLGVAPFNGFTYDHIYGTKFGGTIFDQFGRRQTAAELLASADPRKLT
VLVHATVQKVLFDISGKRPKAVGVLFKDENGNQHQAFLSNSQRSEIILSCGAIGTPQMLL
LSGIGPKDELEEKKISVVLHNKFVGKGMADNPMNAIFVPFKRPVQQSLIQTVGITKMGVY
IEASSGFGQSKDSIQCHHGIMSAEIGQLSTLPPKQRTPEAIQAYIKRKKDIPHEAFKGGF
ILEKIANPISTGQLRLISTNVEDNPSVTFNYFKHPRDLQRCVDGIRMATKMVQSEHFRNF
TQCDKQTTDKILNMSVSANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVNSD
YKVLGVNRLRIVDGSVFDESPGTNPQATVMMMGRYMGLKILRDRLGKGAGV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctgttgccaaccagctctttctcttcttctttctatggctttatactctc
tcttcatctcaagctgggcaccattactctgaatttaggtatccgttcatcaggaaagca
agctcattcccatcatcatcatcatccttctcatcaagtggcgggggagaccatgcatat
gactatatagttgttggaggtggcacagctgggtgtcctttagctgccacactctctcag
aggtttagtgtcttattacttgaaagaggtggagtgccttttgccaatgcaaatgtctcc
ttctcgaagaacttccacatagccctcgctgatacttcatcaacttctgcttcccaatac
tttatttctactgatggagtcctcaatgctagggctagagttttgggtggtggtacttgc
atcaatgctgggttctacactagggcaagcaaaaggtttatacacaaagtaggctgggat
gcaaagttggtgaataagtcgtacccatgggttgagaagcaaatcgttcacaggcctaaa
gttgcaccatggcaggttgttgtaagggacagtcttttggatcttggagtggcgcctttc
aatggattcacatatgatcacatttatggaaccaagtttggtggtaccatttttgaccaa
ttcggccgccggcaaacggctgctgaactacttgcttctgcagaccctcggaagcttact
gtgttggtgcatgccaccgtccaaaaggttctatttgatatttcaggaaagcgaccaaaa
gcagtaggagtcctgttcaaagatgaaaatggaaaccagcatcaagcatttctatcaaac
agccagaggagtgaaataatattgtcatgtggagccattggcacccctcagatgctattg
ctcagtggtattggtccaaaagatgaactcgaggagaagaaaatttcagtagtactccac
aacaagtttgtcgggaaaggcatggctgataatcccatgaacgcaatttttgttcccttt
aaaagaccagtacagcagtccctgatacaaactgtagggattaccaagatgggtgtgtac
attgaagctagcagtggatttgggcaatccaaggatagcattcagtgtcaccatggaata
atgtctgcagagatagggcagttatcaaccttaccgccaaagcaaagaacaccagaggcc
atccaagcttacattaaaagaaagaaggacataccacatgaggcattcaaaggaggcttc
attcttgaaaagattgccaaccccatttccaccggccagctcagattgatcagcacaaat
gttgaagacaacccttctgttaccttcaactattttaaacatccacgtgatctacagcgc
tgtgttgatggtattcgcatggctacaaagatggtgcaatcagaacactttagaaatttc
actcaatgtgacaagcagaccacagacaagattcttaacatgagtgtcagtgctaatgtt
aacctagtacctaagcataccaatgacaccaagtccctagagcagttctgcaaagacacc
gtaatcacaatttggcattatcatggtgggtgtcatgttggcaaggtggtgaacagtgat
tacaaagttcttggtgtgaacaggcttcgcattgtggatggctcggtatttgatgaatct
cctgggactaatcctcaagccacagtcatgatgatgggcaggtacatgggactgaaaatt
ttgagagacagactaggaaaaggagctggtgtttaa
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