Populus trichocarpa (black cottonwood): 18094901
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Entry
18094901 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18094901
KO
K14827
pre-rRNA-processing protein IPI1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
18094901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
18094901
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
18094901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ipi1_N
TOR1L1_N
Cnd1
HEAT_EZ
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
18094901
NCBI-ProteinID:
XP_024445324
LinkDB
All DBs
Position
1:complement(21363746..21378122)
Genome browser
AA seq
863 aa
AA seq
DB search
MAKTKGSSKKQQKRGIDFKKIKRKIGRKLPPPKNTTNTEIKSKAIVLPEQSVASEKAGLA
VSKKGLTLKELLQHTSHHNAKVRKDALMGMKDLFLNHPEELKLHRYAVIEKLRERMSDDE
KTVRENLYQLLKLVILPGCKEDNQGPVISLMMAYIFNAMTHLAIDVRLMAFKFFDLAVEY
HPPSFFSYAEKILQNYEDILRKNQFHLEDKVKLKNALAGLVRCLLLLPSSKEVNLPAKNI
PEKKILQAFEPDVPTVFAEYSVIIKKLKDLVPVLVNCFQDFLPVLHDSLDAQSFDCMLNI
LRSIDLAVAFFIHGIQQGHPESPPLDQSFSSVLLKKLLVVFPLSPMHHLSEKDDDRYVIL
NIVITEIFMHLSEWICPPAVLFEKFLTFVEYVLLEKSCSNVRSNKAVREKQISTLIPFIP
KLVSRVIGNWKNRLLQAFTKTFQDCSPESSVKLACLAAIEEMVISHEDLLCTDVNDSGLS
DYKITWIRELPMLLILLGDRHSSSSKVVLHLLLRLGQRSLLYDDMQGLLKEFYSTDQDKG
NICYGPFLRLARDSQELSICCLYYFSQLDSTLLKSIASCCLCHELDPFMLFRIIEVLHST
YKAGHIQISDFISFLITLASRFKVFPENIFPATERDKKTSNRATFKSLISVVCSCLSQMG
DNSLVFAILEKVILEQISLKPPLDNSCAMLRMLVALDSKPTRLSKQSICSLSNVLSAYLI
DVAHCVPEDDDESMSSIHGQTRRYYLLPSFILFDRSHKLLNLVLNVMGSSINGRSFSLLS
GDRICYAKGSSSIINAIVSVLLWMQREAKVQQILYLYKEEIDHISRSICSLQSLEEIKVP
IEERHIIKCAIDRLKTLTSSLYQ
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaactaagggttcttccaagaagcagcaaaagcgtggaattgacttcaaaaaa
ataaagcgaaagatcggcaggaaattgccacctcctaagaatactactaacacagaaatt
aaatccaaagcaattgttcttccggagcagagtgtggcatcagagaaagcaggtttagct
gtgagcaagaaaggcttgactttgaaagagcttcttcaacatacatcccatcacaatgcg
aaagtccgtaaagatgccttgatgggcatgaaggatttattcctcaatcatccagaagag
cttaaattgcacagatatgctgttatagaaaaattacgtgaacggatgagtgatgatgag
aaaactgttcgagaaaacctatatcaacttcttaagttagtgattttaccgggctgcaaa
gaggataatcaaggacctgtcatttcgttaatgatggcttacatttttaatgcaatgaca
catttagcaattgacgttcgacttatggcattcaaattttttgatctcgctgttgaatat
catcctccttcatttttctcgtatgctgaaaagatacttcaaaattatgaagatattctt
cggaagaaccagttccatttagaagacaaagtcaagctgaagaatgctcttgctggtttg
gtgcgatgcttgttgttgttgccatctagtaaagaagttaacctgcctgcaaagaatatc
cctgagaaaaaaatattgcaagcttttgagcctgatgtgcctacagtatttgcagaatat
tctgtcatcatcaagaagctgaaagaccttgtaccagttttagtcaattgcttccaagat
tttctccctgtacttcacgactcactagatgcacaatcatttgattgcatgcttaacata
cttcggagcatagatcttgcagtcgcattctttatccatgggattcagcaaggtcatccc
gaatcaccacctcttgatcaaagcttctcatcagtattgttgaagaagttactagttgtg
tttcccctcagtccaatgcatcacctttcagaaaaggatgatgacagatatgttatcttg
aacattgtaattacagaaatatttatgcacttaagtgaatggatctgcccacctgctgtc
ttatttgagaaatttctaacatttgtggagtacgtgttgcttgaaaagagctgcagtaac
gtgcgatctaacaaagcagttcgagaaaagcagatatctacactgattccttttatccca
aaacttgtgtcacgggtgattggaaattggaagaatcgccttctccaggcatttacaaag
acattccaggattgcagtccagagtcttcagtaaaattagcttgccttgctgcaattgaa
gaaatggtcatttctcatgaagatctgctgtgcacagatgtcaatgattcaggactatct
gactacaagattacttggataagagagctgcctatgttactcattctgctaggcgaccgg
cactcatcctcttccaaggttgtgttgcatcttctacttcgcctggggcaacgttcattg
ttgtatgatgatatgcaaggcttgctgaaagagttctacagcacagatcaagacaaaggg
aacatatgttatggtccttttttaaggctagccagggattcacaagaactctctatctgt
tgtctttattatttttctcaactggattcaactttgctgaagtcaattgcttcttgctgc
ttgtgtcatgagttggatccgtttatgttattccggatcatagaggttttacattcaacc
tacaaagctggccatattcagatttctgacttcatcagcttcttaatcactttggcttcg
cgtttcaaagtttttcctgaaaatatttttcctgccacggagagagataagaagacctca
aatcgtgcaacttttaaatcattgatcagtgttgtttgctcatgcctgtcgcagatgggt
gacaattctctagtttttgcgattctagagaaagtaatactagagcagatatcattaaaa
ccacctctggacaattcctgtgctatgctcagaatgcttgttgcactggattctaagccc
acgagactttctaaacaaagtatttgctctttaagcaatgtcctttcagcatatctcatt
gatgttgcacattgtgttccagaagatgatgatgagagcatgagctccatccatggacaa
acacgtcgttattatcttctgcctagctttatcctgtttgatagaagtcacaaacttctc
aatcttgtgttgaacgtgatggggtcatcgattaatggaagaagtttctcacttctatct
ggtgatcgtatctgttatgccaaggggagctcaagtattataaatgctattgtttctgtt
ttactatggatgcaaagggaagctaaggttcagcaaattctttatttatataaggaagag
attgaccacatttcacgaagcatatgctctttacagtctttagaggaaatcaaggtgcca
atagaagaaagacacataataaagtgtgcaattgatcgattaaagactctaacaagttca
ttatatcagtag
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