Populus trichocarpa (black cottonwood): 18094916
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Entry
18094916 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: dnaJ protein homolog
KO
K09503
DnaJ homolog subfamily A member 2
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
18094916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
18094916
03029 Mitochondrial biogenesis [BR:
pop03029
]
18094916
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP40 / DNAJ
18094916
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
18094916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaJ_C
DnaJ_CXXCXGXG
DnaJ
Anti-TRAP
zf_C2H2_13
DUF5351
Motif
Other DBs
NCBI-GeneID:
18094916
NCBI-ProteinID:
XP_024449471
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All DBs
Position
1:complement(22181471..22183584)
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AA seq
415 aa
AA seq
DB search
MFGRAPKKSDNTRYYEILGVSKNASRDDLKKAHRKAAIIIKNHPDKGGDPVKVQIIMDCI
ENYCSLKSWPEKREIYDRHGEETLKDGMGAGGAAQNNPFDPFXSFFGGSSRGRRQRQRGE
DVVHSLKVSLEDLYLGTSKKHSLTWNVICSMCNGKGSKSGGSIKCGVCQGSGMKVSIRQL
GPSMIQQMQRPCNECKGSGETIRDKDRCPQCKGEKDVPENKVLEVIVEKGMQNGQKITFP
GEADEALFTGDIVFVLQQKEHPEFKRKGDDLFVEHTLSLTEALCGFKFALTHLDGRQLFI
KSNPGEVVKPDSYKAINDEGMPMYQRPFMKGKLYTHFTVXFPDSLTPDQVKAMGTILLRP
LSQLTDKGVDECEETTLHDVNIEXEMMRKQQARKEAYDKDEGMPHGGQRVQCAQQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggagagcaccaaagaagagtgacaacacaaggtactatgagatattaggggtg
tcaaagaatgccagccgagatgatttaaagaaagctcaccggaaagctgccatcattatc
aagaaccaccctgataaaggtggtgatcctgtcaaggtacaaattatcatggattgtatt
gaaaattactgcagtttaaagagctggcctgaaaaacgcgaaatttatgatcgccatggg
gaagaaacactcaaggacggaatgggtgctggcggtgctgcccaaaacaacccttttgac
cctttttaatctttctttggtgggagtagccgagggaggaggcagagacaacggggagag
gatgtggttcattcattgaaggtgtcattggaggatctgtaccttggaacatcaaagaag
cattctctaacctggaatgtgatttgctccatgtgcaatggaaagggatcgaaatctgga
gggtcgatcaagtgcggtgtctgccaaggaagtggcatgaaggtctcgataaggcaactc
gggccttcaatgattcaacagatgcagcgtccttgcaatgaatgcaagggatcgggagag
accataagagataaggatcgttgcccacagtgcaagggggagaaggatgttccagagaac
aaggttttggaagttatagtggagaaagggatgcagaatggacagaagattaccttccct
ggtgaagctgacgaagcgttgttcactggtgatatcgtctttgtccttcagcagaaggaa
cacccagaatttaaaagaaagggagatgatctttttgtggaacatactctgtcgctcact
gaggctctctgtggcttcaagtttgcattgacacatcttgatggcaggcagctttttata
aaatcgaaccctggggaggttgtcaaacctgattcatataaggcaatcaatgatgagggt
atgccaatgtaccaaaggccattcatgaaagggaagttgtacacccacttcaccgtgnga
tttcctgattctctgactcctgatcaagttaaagcaatggggactattctgcttaggcca
ttaagtcagttgacagataagggggtggatgagtgtgaggagactacactgcatgatgtt
aacattgaataggaaatgatgaggaagcagcaggctcgcaaggaagcatatgataaggat
gagggcatgcctcatggtggtcagagggtccaatgcgctcagcagtga
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