Populus trichocarpa (black cottonwood): 18094926
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Entry
18094926 CDS
T01077
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
18094926
03036 Chromosome and associated proteins [BR:
pop03036
]
18094926
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
18094926
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18094926
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
18094926
microRNA pathway
RISC loading complex
18094926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18094926
NCBI-ProteinID:
XP_006369390
UniProt:
U5GUY7
LinkDB
All DBs
Position
1:22939336..22948524
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AA seq
911 aa
AA seq
DB search
MESADEQNGNGSQEALPPPPPDVPPNVVPVKAEPEPVKKKPLRVPIARRGLGSKGQKMPL
LTNHFKVNVTNTEGYFFHYCVSLAYEDGRPVDGKGVGRKVIDRVHETYDTEFGKDFAYDG
EKSLFTVGPLPRNKLEFTVVLEDVVSNRNNGNASPDGHGSPNEGDRKRLRRPYHSKTFKV
EISFAAKIPMQAIANALRGQESENSQEAFRVLDIILRQHAAKQGCLLVRQSFFHNDPKNF
VDLGGGVLGCRGFHSSFRTSQGGLSLNIDVSTTMIIQPGPVVDFLIANQNVRDPFSLDWA
KAKRMLKNLRVKASPSNQEYKITGLSEKTCKEQMFQLKQKNGGDGGIEAVEITVYDYFVN
HRKIDLRYSGDLPCINVGKPKRPTYIPLELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQ
ERMTVLSSALKSSKYDAEPMLRSCGISINPSFTQVEGRVLPAPKLKVGNGEDFFPRNGRW
NFNNKKLVEPSRIEKWAVVNFSARCDIRNLVQNLTKCAEMKGIPIEDPFDVFEENPQSRR
APPVVRVEKMFEQIQSRLPGQPKFLLCLLPERKNSDIYGPWKRKNLAEYGIVTQCIAPQR
VNDQYITNVLLKINAKLGGLNSMLAVEHAPSLPLVSKVPTLILGMDVSHGSPGQSDVPSI
AAVVSSRQWPLISRYRACVRTQSPKLEMIDSLFKRVSETEDEGIIRELLLDFYVTSGKRK
PDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWSPTFVVIVAQKNHHTKFFQPGS
PDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLLDEVGFSADDLQELVHSL
SYVYQRSTTAISVVAPICYAHLAATQMGQFMKFEDTSETSSSHGGVTSAGAVPVPQLPRL
QEKVCNSMFFC
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagctgatgaacaaaatggaaatgggtcacaggaagccctcccacctccccct
cctgatgttccaccaaatgttgttccagttaaagctgaacctgagccagtcaagaaaaaa
cctctgcgggttccaatagccaggcgtggccttggatccaaaggccaaaagatgcctcta
ttgaccaatcactttaaagtcaatgttactaatactgagggttacttctttcactactgt
gtttcccttgcttatgaagatggccgccctgttgatggtaagggtgttggaagaaaggtg
attgatagggtgcatgaaacttatgataccgagtttggaaaggattttgcttatgacggt
gaaaagagcttgttcactgttggtccccttcctcgcaacaagcttgagttcacggttgtg
cttgaggatgtagtatctaacagaaataatggaaatgcaagccctgatggtcatggaagt
ccaaatgagggtgaccgaaagaggttgcgccgtccctatcactccaagacattcaaagtg
gagatcagttttgctgcaaaaatccccatgcaagccattgcaaatgccttgcgtggtcag
gaatcagagaattcccaagaagcctttagagtgctggatattatattgcgacagcatgcc
gccaagcagggctgcctccttgtgcgccaatccttcttccataatgatccaaaaaatttt
gtggatttgggaggcggtgttcttggctgcagaggtttccactcaagttttagaacatct
cagggaggcttgtctcttaatattgatgtgtctacgaccatgataatacagccaggtcct
gtggtagattttctaattgccaaccaaaatgtgagagatccattttcacttgactgggcg
aaggcgaaacgaatgctcaaaaatctgagggttaaggcaagtccttccaatcaagagtac
aagataactgggttgagtgagaagacttgtaaagaacaaatgtttcagttgaaacaaaaa
aatggaggggatggtgggatcgaggctgttgaaataactgtttatgattattttgtcaat
caccgcaaaatcgatttacgatattctggtgatctgccatgcattaatgttgggaagcca
aagcgccctacttatattcctcttgagctttgttccctggtgtccctacaacgctatacc
aaagcactgtccacacttcaaaggtcttcactggtggagaaatcacggcagaagccgcaa
gaaaggatgactgttttatctagtgctctgaagagcagcaagtatgatgctgaacctatg
ctacgctcgtgtggcatttcaatcaaccctagtttcacacaagtggaaggccgtgttctg
cctgctccgaagctgaaagttggcaacggggaagatttcttcccaagaaatggacgttgg
aatttcaataacaagaaacttgtggagccatctaggatcgagaagtgggctgtcgtgaac
ttctcagctcgctgtgatatacgcaaccttgtacaaaatctcacaaaatgtgcagagatg
aaaggaattcccatagaagatccttttgatgtatttgaggagaatccacaatcaagacgt
gccccaccagtggttagagtggagaaaatgtttgagcaaattcagtctagacttcctggg
caaccaaagttcttactgtgcttgcttcctgagagaaagaattctgatatatatggccca
tggaagcgcaaaaatcttgctgaatatggaattgtcactcagtgcattgcgcctcaaaga
gttaacgaccaatatattaccaatgttctcctgaagatcaatgcaaagcttggtgggttg
aactctatgttggctgtggaacacgccccctcattacctcttgtgtcgaaggttcccacg
cttatccttgggatggacgtgtcccatggctctcctgggcagtctgatgtcccttcaatt
gctgcggtagtcagctccaggcagtggcctttgatttctcgctatcgggcatgtgtgcga
acacaatccccaaagcttgagatgattgattcattatttaagcgagtgtctgagactgag
gatgaaggaataattagggagcttctgttagacttttatgtgacttcaggaaaaaggaaa
cccgatcagatcatcatatttagagacggggtcagtgaatcacaattcaatcaggtcttg
aatatcgaattggatcagataattgaggcgtgcaagtttcttgatgagaagtggtcccca
acgtttgtggtaattgtagctcagaaaaaccaccacactaaatttttccaacctggatct
cctgataatgtaccacctggtacgatcattgacaacaaagtctgccatccaagaaacaat
gacttctatctctgtgctcatgctgggatgattgggactacaaggcctactcactaccat
gttttgttagacgaggttggtttttcagcagatgatctgcaggaacttgtgcattccctc
tcatatgtataccaaagaagcacgactgccatctctgtagttgcaccaatctgctatgcc
cacctggcagctactcaaatgggccagtttatgaagtttgaagatacttctgagacttcc
tcaagccatggtggggtgacctctgcaggagctgttcctgtcccacagttgccgaggttg
caggagaaagtttgcaattccatgttcttttgttga
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