Populus trichocarpa (black cottonwood): 18095014
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Entry
18095014 CDS
T01077
Name
(RefSeq) beta-hexosaminidase 2
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00511
Other glycan degradation
pop00513
Various types of N-glycan biosynthesis
pop00520
Amino sugar and nucleotide sugar metabolism
pop00531
Glycosaminoglycan degradation
pop00600
Sphingolipid metabolism
pop00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pop00604
Glycosphingolipid biosynthesis - ganglio series
pop01100
Metabolic pathways
pop04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
18095014
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
18095014
00513 Various types of N-glycan biosynthesis
18095014
00531 Glycosaminoglycan degradation
18095014
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
18095014
00604 Glycosphingolipid biosynthesis - ganglio series
18095014
00511 Other glycan degradation
18095014
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
18095014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
18095014
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
18095014
Chaperones and folding catalysts [BR:
pop03110
]
Intramolecular chaperones
Others
18095014
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Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
18095014
NCBI-ProteinID:
XP_052305922
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Position
1:25124767..25132717
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AA seq
582 aa
AA seq
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MTSNLVISSRCSLFLTLFYLLVSASLTATSAQWVWPKPRTLSWPIPLATILSPNFTISSP
YHQHLSPAVNRYRLQILTEHHLPLVPPPFNLSNSSPPLQALTITVKDLAAPLQHSVDESY
ALAIPTASSTANLTAETVWGAMRGLETFSQLVWGLKPLLVPVGLDVWDSPLFEHRGIILD
TSRNYYPVDDILRTIKAMSANKLNVFHWHITDSHSFPLVLPSEPALADKGSYGNDMLYSP
ADVATIVRFGLEHGVRVLPEIDSPAHTGSWAEAYPDIVTCANMFWWPAESKWADRLASEP
GTGQLNPLNPNTYQVLKNVIGDAVALFPEPFFHAGGDEIIPGCWKADPAIQSFLSKNGTL
SQLLEKFVNSTFPYIVSLNRTVVYWEDILLDANVKVDPSFLPPEHTILQTWNNGPNNTKL
IVSSGYRAIVSSSEFYYLDCGHGGFLGNDSQYDPPPTSGGSGNGGSWCAPFKTWQTIYNY
DIAYGLTPEETKLVLGGEVALWSEQADPTVLDVRIWPRASAMAETLWSGNRDESGKKRYA
EAMDRLNEWRHRMVNKGIRAEPLQPLWCIKNPGMCNTVHPSD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtaacttggtaataagcagccgctgttccttattcttaacgttgttttacttg
ctggttagtgcctcccttacagcaacatcagctcaatgggtatggccgaagccaagaacc
ctgtcttggccgatcccactcgccactattctctccccaaacttcactatctcctccccc
taccaccaacatctctccccagccgttaaccgttaccgcctccaaatcctcacggaacac
cacctccctctcgttcctcccccattcaacctctccaactcatcccctcctttgcaggcc
ctgaccatcactgtcaaagacctcgccgccccactccaacactccgttgacgagtcctac
gcccttgccatccccactgctagctccaccgccaatctgacggccgagactgtatggggc
gcaatgaggggtctggagacgttttctcaactggtttggggattgaaaccattgcttgtc
cctgttgggctcgacgtgtgggactcgcctctgtttgagcatagagggatcattttggat
acctctaggaattactacccagtggatgacattttgaggaccatcaaagccatgagtgct
aataagctcaacgttttccattggcacattaccgattctcactcttttcctttagtgctt
ccatctgagcctgctcttgctgacaaagggtcttatgggaatgacatgctctactctcca
gctgatgttgcaacaattgttcggtttggtttggagcatggcgtcagggtactaccggaa
attgattctccagcacatacaggatcgtgggctgaagcctatccagatatcgtgacttgc
gcaaacatgttctggtggccggctgaaagcaaatgggctgaccggcttgcatcagaacca
ggaactggccagctaaatcctttgaacccaaatacctaccaagttctaaaaaatgtgatt
ggtgatgcagttgccttgtttcctgaaccgtttttccatgctggaggtgatgagatcatc
ccaggctgttggaaagctgacccggccattcagtccttcctatccaaaaatggaactctc
agtcaactccttgagaaatttgtgaactcaaccttcccttacattgtgtccctcaatcgc
acggtggtttactgggaagatattttgttggatgccaatgtcaaggtggacccttcattt
cttccacctgagcataccatcctacagacatggaataacggtcccaacaacacgaaactg
attgtttcttctggttacagagctattgtctcatcctcagagttttattatttggattgt
ggacatggtggttttcttgggaatgacagccaatatgatccaccaccaacaagtggtggc
agtggcaatggtggatcatggtgtgcacctttcaaaacatggcaaaccatatataactat
gacatagcatatggattgactccggaggagaccaaattggtgctagggggtgaagtagca
ttatggtcagagcaagcagatccaacagttttggacgtgcggatttggccaagagcttca
gcaatggctgagactttatggtcagggaacagagatgagtcaggcaagaagaggtatgca
gaggcaatggatcgtttaaatgagtggagacatagaatggtcaacaaaggaatcagagct
gaaccactgcagcctctctggtgcatcaagaaccctggcatgtgcaacacagttcatcca
agtgattag
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