Populus trichocarpa (black cottonwood): 18095019
Help
Entry
18095019 CDS
T01077
Name
(RefSeq) myosin-12
KO
K10357
myosin V
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
18095019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
18095019
04131 Membrane trafficking [BR:
pop04131
]
18095019
03029 Mitochondrial biogenesis [BR:
pop03029
]
18095019
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
18095019
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
18095019
mRNA cycle factors
P-body specific factors
18095019
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Myosins
18095019
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
18095019
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
18095019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
Hpr_kinase_C
Fez1
CENP-F_leu_zip
AAA_22
AAA_16
AAA_6
nSTAND3
CbiA
TSC22
Motif
Other DBs
NCBI-GeneID:
18095019
NCBI-ProteinID:
XP_024449793
LinkDB
All DBs
Position
1:25166726..25179115
Genome browser
AA seq
1558 aa
AA seq
DB search
MMIQGTPVNIIVGSHVWIEDPEEAWMDGEVTEIKGRDATIITTNGKTVVADISSIYPKDT
EAPPAGVDDMTKLAYLHEPGVLYNLACRFALNEIYTYTGNILIAVNPFRRLPHLYNIHMM
EQYKGAAFGELSPHLFAVADTCYRAMINDQGSQSILVSGESGAGKTETTKMLMRYLAFMG
GRSAGNEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNGKISGAAVRT
YLLERSRVCQVSDPERNYHCFYMLCAAPPEDVERFKLGDPRTFHYLNQTNCHEVANVDDA
REYLETRNAMDIVGISQDEQDAIFRIVAAILHLGNINFVKGKEVDSSKLKDDKSHYHLRT
AAELLMCDEKALEDSLCKRVIVTPDGNITKPLDPASAVLSRDAMAKTVYSRLFDWIVDKI
NSSIGQDPTATSIIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTR
EEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTYKAHKRFS
KPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLDASRCPFVANLFPPLPEET
SKQSKFSSIGTRFKQQLQALMETLNTTEPHYIRCVKPNTVLKPGIFENINVLNQLRCGGV
LEAIRISCAGYPTKRTFDEFLDRFGMLAPDVLDGSDEKSACVAILDRMGLTGYQIGKTKV
FLRAGQMAELDARRAEVLANAVRRIQRQIRTYLTRKEFITLRRATIHLQKLWRAQLARKL
YEQMRKEAASIRIQKNVRAHEARTFYTNLQASAIVIQTGMRAMAARNEYRYRRRTKAAII
IQTRWKRYRSLSSYKQHKMATLALQCLWRARTARKELRKLRMAARETGALKEAKDKLEKR
VEELTWRLEFEKHLRLDLEEAKGQEIVKLKSSLHEMQGQLDEAHATIIQEKEEAKLAIEQ
APPVIKEVPVVDNTKLELLKNQNDELENELSELKKKMEEFENKCSELEKESKARTKEAEE
SHLKTMTLQDTIERLELNLSNLESENQVLRQQALDASENEGLSEELKILKSKIAELESEN
ELLRKQPAIVEQMTPEIILPRVKSFENGHGHQREEEPQMTKESGPPISLLTTQRSLTDKQ
QENHDVLIKCLMEDKRFDETRPVAACVAYKTLLQWRSFEAEKATIFDKIIHTIRSSIESQ
DNITDLAYWLSSTSTLLYLLQNTLKASNTKNVSSRSNRNSPATIFGRMALGFHSSSVGMG
MSSGYSGMVGKGNEQLKVEAKYPALLFKQHLTAYVEKIYGLIRDSVKKEIGPFLNLCIQA
PRSIRGSSKNIHSSIVAKQQSSNIHWQSIVNKLDLTLGIMSENHVPPVFMRKIFSQVFSF
INVQLFNSLLLRRECCSFSNGEYVKAGLQELEQWCRKASDQFAGSSWDELRHIRQAVGFL
VSHQKAQKSLEEITNELCPMLSIPQIYRIGTMFWDDKYGTQGLSSDVISKMRTLMAEDSI
KMPNNTFLLDVDSSIPFSMEEIFGSLSTIRLSNMDPPPLLRQRSDFHFLLQETQTETA
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atgatgatccagggaactccagtgaacatcatagttggatcccacgtgtggatagaggat
cctgaggaagcatggatggatggtgaagttacagaaatcaagggcagagacgccaccata
atcaccacaaatgggaaaactgtagttgctgatatttcaagtatatatccaaaagacaca
gaggctccaccagcaggagtcgatgacatgacgaaattagcatatctccatgaaccagga
gtcttgtataaccttgcttgccggtttgcactcaacgagatatatacttacactgggaac
attctaatagcggtgaatcctttccggagactaccgcatttatacaacattcacatgatg
gagcagtacaaaggagctgcttttggagagctaagtccacacctttttgctgtggcagac
acttgttacagagcaatgataaacgatcagggaagccagtccattttagtaagtggggag
agtggagctggtaaaacagagacaacaaagatgctcatgagataccttgccttcatgggg
gggagatctgcgggtaatgaaggaagaacagtggaacaacaagttttggagtccaatcca
gtattggaagcatttgggaatgcaaaaactgtcaaaaacaacaattcgagtcgatttgga
aagtttgttgagatacaatttgataagaatgggaagatatctggagctgcagttcgtact
taccttcttgaaagatcacgtgtttgccaagtctctgacccggagagaaactaccattgt
ttttacatgctctgcgcagcaccaccagaggatgtcgagagattcaagttaggggaccca
agaactttccattatttgaaccaaacaaactgtcacgaagtagcaaacgtagatgatgca
agggagtatttggaaaccagaaatgcaatggatattgtcgggatcagccaggatgaacag
gatgcaatattccgcatagtagctgcaatcctccatctcggaaacatcaactttgtcaaa
gggaaggaagttgattcttctaaacttaaggatgataaatcacactaccatcttcgaaca
gcagcggagctactgatgtgtgatgagaaggcactggaagactcactttgcaagcgcgtc
atagtgactccagatggtaacattacaaaacctctggacccagcttcagccgtcttaagt
cgtgatgccatggccaagactgtgtactcaaggctgtttgattggattgtggataagatc
aacagttcaattggtcaagatcctactgcaacaagtataatcggagtccttgatatttat
ggctttgaaagcttcaagatcaacagttttgagcagctgtgtatcaacctaacgaatgag
aagttacaacaacattttaaccagcatgtattcaagatggagcaagaagagtatacaagg
gaggaaataaactggagctatgtagagttcgtagacaaccaggatgttttggatcttatt
gagaagaaaccaggaggtataatagcccttcttgatgaagcctgcatgtttcccaagtca
actcatgagacatttgcacagaagatgtaccagacatataaagctcacaaacgcttcagc
aagccgaaacttgctcgaacagacttcacaatcaatcattatgcgggagatgttacttac
caagcagatcagtttcttgataaaaataaagattatgttgtagcagaacatcaagctcta
ttagatgcttccaggtgtccttttgttgctaaccttttccctccactacctgaggagaca
tctaagcaatccaagttctcttcaattggtacccgcttcaagcaacaattacaagctcta
atggagacattgaatacaacagaaccgcattacataagatgtgtaaagccaaatacagta
ctaaagcctggaatctttgagaacatcaatgtcttaaaccaactaagatgtgggggagta
ctagaggcaattaggataagttgtgctggttatccaaccaaaagaacatttgatgagttc
cttgatcgttttggaatgttggctcctgatgttctagatggatctgatgaaaaatcagca
tgtgttgccatcttggacaggatgggtttaacgggctatcagattgggaagacaaaggtg
ttcctcagagctgggcagatggctgagttggatgcacgaagagctgaagttttggctaat
gctgtcaggcgtatccagagacaaatccggacatatctgaccagaaaagagttcatcacc
ctaaggagggctacaattcatttgcagaaactctggagagcacaacttgcacgtaagcta
tatgaacagatgaggaaggaagcagcttctatccgtatacaaaagaatgtccgtgctcat
gaagcaagaacattttacactaacttgcaagcatcagcaatagttatccaaactggaatg
cgagcaatggcagcacgtaatgaatacagatacagaagaagaaccaaggctgcaattata
attcagactcgctggaaaagatatcgttctctttcctcgtataaacagcataagatggca
actctagcattgcaatgtctttggagagcaaggacagccaggaaggagcttagaaagctc
aggatggctgcaagagaaacaggggcacttaaagaagccaaggacaagctagagaagcgt
gttgaagagctaacatggcgactagaatttgaaaagcacttgcggcttgatctggaagaa
gctaaagggcaagaaattgtaaaactgaaaagttcattacatgaaatgcaaggccagcta
gatgaagcccatgccacaataatccaggagaaagaagaggcaaagttagctatagaacaa
gctccaccggtcattaaagaggtgccggttgtggacaacaccaagctggagttactcaag
aatcagaatgatgaactagagaatgagctaagtgagctgaagaagaagatggaggaattc
gagaataagtgttctgaactagagaaagaaagcaaggcaagaactaaagaagctgaagaa
tcacacctgaaaacgatgacacttcaagataccattgaaagattggaattaaatctgtcc
aacctggaatcagagaatcaggttttacgacagcaggctttggatgcatcagaaaatgag
ggtctctctgaagaattaaaaatcctcaagagcaagattgcagagctggagtcagagaat
gaactcctccgcaaacaaccagcaattgtagaacagatgactcctgaaataattctgcct
cgggtcaagagttttgagaatggtcatggtcatcaaagagaagaagagcctcaaatgaca
aaggaatctgggcctcccatctccctcttaactacacaaagatccctaacagacaaacag
caggaaaaccatgatgtacttatcaagtgtcttatggaagataagcggtttgacgagacc
agacctgtcgctgcttgtgttgcgtataaaacacttcttcagtggagatcctttgaagca
gagaaggcaactatttttgacaagattattcacacaatccgatcatcaatagagagtcaa
gacaacatcactgatctagcatactggctatcaagtacttctacccttttgtatctgctt
caaaatactcttaaagcaagcaatacaaagaatgtatcttcacggagtaaccgaaactcg
ccagctaccatatttggtagaatggcgctgggattccactcatcttcagttggcatggga
atgtcaagtggttacagtggaatggtgggaaaaggaaatgaacaattaaaagtggaagct
aagtacccagcactgctatttaagcaacatctgactgcatacgttgagaaaatatatggg
ctgatcagagacagtgtaaagaaagagattggtccatttctgaatttgtgcatccaagct
ccaagatcaataagagggtcatccaaaaatatccattccagtattgttgccaaacagcaa
tcatcaaatatacactggcaaagcattgtcaataagctagatcttacattgggcataatg
tcagagaaccatgtccctccagtgttcatgaggaaaatctttagtcaggttttctcattc
ataaatgtacaactttttaacagcttattgcttcgtcgtgaatgctgctcgtttagcaat
ggagaatatgtaaaggccggtttgcaggaattggaacagtggtgtcgtaaagcatcagat
caatttgcaggatcatcatgggatgaactcagacacataaggcaagctgttgggtttctg
gtctcgcatcaaaaggctcaaaaatctttagaagagatcacaaatgaactctgcccgatg
ttgagcattccacaaatatatcgcattgggaccatgttctgggatgacaaatatggaact
cagggattatcttcagatgtgattagcaagatgagaacattgatggcagaagattcaata
aaaatgcctaataatacattcttactcgatgttgattcaagcatacctttctcaatggaa
gagatattcggatccttgagcacaattcgtctatctaacatggatcctccaccgctgctc
cgtcaaagatcagatttccactttttattgcaggaaacacaaacggaaacagcctaa
DBGET
integrated database retrieval system
