Populus trichocarpa (black cottonwood): 18095066
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Entry
18095066 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18095066 isoform X4
KO
K09527
DnaJ homolog subfamily C member 7
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
18095066
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP40 / DNAJ
18095066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
DnaJ
TPR_2
TPR_8
TPR_12
TPR_19
TPR_7
TPR_11
TPR_16
TPR_6
Motif
Other DBs
NCBI-GeneID:
18095066
NCBI-ProteinID:
XP_024442460
LinkDB
All DBs
Position
1:complement(27105706..27114639)
Genome browser
AA seq
1301 aa
AA seq
DB search
MNPSNFDNLNSGFSNSTRISNQNPNFSSRSSSSSSTKGGLSRPRLAKVRRQSNPQNFKSN
EETWVGLGFNQFRPDRSRVEPGGSGSGGTEAFVFGASPSNMGFNSNSGKGIIEELKSLRT
GSETNVDVSEKSGFVFASDGNKSHGVDEIMQKLSIDDKEKVVDGASKLSANGKFGSGDNV
GSSIGRNVESLPPDELEKKLNIEEAGDATNGGGSFQADDIKKFGFKSSEKGSEMFAAAAK
NALPDQIKNLNIKDYVVTNNVNNETNEKDSFAFGSRESIGGYVGGESESALSHEMGCKLK
IGSAKVESSGQTNMGFSSCRISRKDMPTVNKGDKKFHDCGDPTEFIFEGGTPGKDLSGIH
ASMDQPKVDTQPIGVAGPSHVFSSSRLAGWNAFRVPPTGGLEKTDGFSFTSKQDGAGSPF
VEFKTPNPKGNLFTGLDPKMEFSTKFKDSKVKKKRGKLKQPVKVPLSPGLDFVTRESGSQ
EIPEASESYSPMDISPYQETLSDARNSRETSVTSEESFALDSQHASTDSQPTVLNDAIDE
DLVVAAHRMDINEEDMKCRETKEENSENCFDKGIGAENHMEDSVSGAETESLKSANEEID
SINDVIVTSAESEASSSTNLDSDLSTQFFSAVSSEDTVNSGFTFAASSTAQVSPKHHHKK
NNLVRADNDSFNSSATSKGSYASSSLQFTPFSGSSSPLSPVRSKKAGLSAPSHVVGDNGE
LLKGLEINQGSVSASVAAQEACEKWRLRGNQAYKNGDLSKAEDCYTQGVNCVSKSETSVS
FLRALMLCYSNRAATRMSLGRMRDALGDCKMAAAIDPNFIRVQVRAANCYLALGDVEGAV
QYFKKCLQFGIDACVDRKISVEASDGLQKAQKVSECMQHSAELLKRGAPNDAESALHVIA
EGLLISSCSEKLLEMKAESLFMQLRKYEDVIQLCEHTFDSAKKNSPPLHADYHVENIGPE
LTKDTSFMIWRCCLIFKSYFHLGRLEEAIGSLEKQVEPPSTATRIGIETQESLVLLAATV
HELIRHKLQAAGNEAFQAGKHSEAIEHYSAALSRKIESRPFAAICFCNRAAAYKALGQIT
DATADCSLAIALDGNYLKAISRRATLYEMIRDYGQAARDLQKLVAVLTKQVEEKTKQFGH
SDRTTNLANDLRQARLRLSTIEEAARKEVPLNMYLILGIEPSASASEVKKAYRKAALRHH
PDKAGHSLARSDNGDDSLWKEIGEEVHKDTDRLFKMIGEAYAMLSDPAKRAQYDLEVMRN
DLKKQSGSSTYRTHTDAPNYPFERSSSRRQWKEGWRPYGRY
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgaacccatcaaattttgataatttaaattctgggttctcaaattcaacccgaattagt
aaccaaaatccaaactttagctctcgatcatcatcgtcctcgtcaactaaaggtggtctt
tcgaggccaagattggcaaaagttaggaggcaatcgaatccccagaattttaaatccaat
gaagaaacctgggttgggctcggtttcaatcagttccgacccgataggagtcgggttgaa
ccgggtggttctgggagtggtggtactgaggcgtttgtgtttggagctagtccaagtaat
atggggtttaactcgaattccggcaagggaattatagaggaattgaaaagtttgagaact
ggaagtgaaactaatgtagatgtgagcgagaagagtggttttgtttttgcaagtgatggt
aataagagtcatggtgttgacgagatcatgcagaagttgagcattgatgataaggagaag
gttgtagatggggcgtctaagttaagtgctaatggcaagtttgggagcggtgacaatgta
ggtagttctattgggagaaatgtggagtcactgccaccagatgagttggagaagaaattg
aatattgaagaggctggagatgccactaatggtggtggtagttttcaagctgatgatatc
aaaaagtttggatttaaaagtagtgaaaagggtagtgaaatgtttgccgctgctgcaaag
aatgcccttcctgatcaaatcaagaatttgaacataaaggactatgtagtcactaacaat
gttaataatgagaccaatgagaaggatagttttgcctttggaagcagggaaagcattggt
ggttatgttggtggagagagcgagagtgcactttcacacgagatggggtgcaagttgaaa
attggaagtgcgaaggtagaatcttcaggtcaaaccaacatgggattttcttcttgtcga
atctccagaaaggatatgccaactgtaaataagggtgataagaaattccacgattgtggt
gatcccactgaatttatttttgaaggaggaacgccgggtaaagatttaagtggtattcat
gcatctatggatcagccaaaagttgatacacaaccaattggagttgcgggaccatctcat
gtcttctcatccagtagattggctggttggaatgctttcagggtgccacctactggtgga
cttgagaagacagatgggtttagttttacaagcaagcaagatggcgctgggtcgccattt
gtagaatttaaaacgccaaatcctaaaggaaatcttttcactggcttagatccgaagatg
gaattcagtacaaagtttaaagattcaaaagtaaagaagaaaaggggaaagttgaagcaa
cctgtcaaagtccctctgtcgccaggtctagattttgttaccagggaaagtggttcccaa
gaaattccagaggcttccgaatcatattcaccaatggatatttcaccatatcaggaaaca
ttgtctgatgctagaaattccagggaaacttctgtcacatcagaggagtctttcgcacta
gatagtcaacatgcatcaactgattcacaaccaactgttctgaatgatgcaatagatgaa
gatctggttgttgcagcacacagaatggatataaatgaagaggatatgaaatgtagagaa
actaaagaggaaaattctgaaaactgttttgataaaggtatcggagctgaaaatcatatg
gaggattctgtttcaggggctgaaactgaaagcttgaaatctgcaaacgaggaaatagat
tctatcaatgatgttatagttacgtcagcagaaagtgaagccagttcaagtacaaatcta
gatagtgacctcagcactcaattcttttcagctgtgagttcagaagatactgtcaattca
ggcttcacctttgctgcctcttctactgcacaagtatcacctaagcatcatcataaaaag
aacaatctcgttagagctgataatgattcctttaattccagtgctacttccaaaggttca
tatgcatcatcttctttgcaatttacaccattttctggatcttcttcacccttgtcccct
gtacggagcaagaaagctggcctatctgctccttcacacgtggttggtgataatggtgag
ctgcttaaaggactggagatcaatcaagggtctgtttctgcatctgttgcagctcaagaa
gcatgtgagaagtggcgactgaggggaaaccaagcatataaaaatggggatttgtctaaa
gctgaggattgttacacacaaggtgtaaattgtgtttctaaaagcgagacatctgtaagc
tttctcagggcattgatgttgtgctatagcaaccgtgcggctacccgtatgtctcttgga
agaatgagagatgcactaggagactgtaagatggctgctgcaattgatcccaattttatc
agggtgcaagtcagagctgcaaattgttaccttgctctgggggacgttgaaggtgcagtg
caatatttcaaaaagtgcttgcagttcggcattgatgcctgtgtagaccgaaaaatttct
gtagaagcctctgatgggttgcaaaaggcacagaaagtgtctgagtgcatgcaacattct
gctgaacttctgaaacggggagcacctaatgatgcagagagtgctttacatgtaattgct
gagggtttgttgataagttcatgctctgaaaaattacttgaaatgaaagcagagtctctt
ttcatgcagctgcggaagtatgaagatgtaattcaactgtgtgagcatacatttgactct
gccaagaagaattctcctccattacatgctgattaccatgtagaaaatattggtcctgaa
ctcacaaaggacacatcatttatgatctggcgttgctgcctcattttcaaatcttacttc
caccttggaaggctggaggaggctattggttcactagagaagcaagtggaacctccttct
actgcaacaaggattggtattgaaactcaagaatcactagtgctcttagctgccactgta
cacgaactcatacgccataagctgcaggctgcagggaatgaagcatttcaagcaggaaag
cattcagaagctatagaacattacagtgctgctctgtcacgtaaaatagaatcacggcct
tttgcagccatttgtttttgcaatagagctgctgcatacaaagcactgggccaaatcact
gatgctacagcagactgcagcctagcaatagctcttgatggaaactatttgaaggcaatt
tctagacgagccactttatatgagatgattagggattatggacaagcggctagagatctt
cagaagctggtagctgttctcactaagcaagtagaggagaaaactaaacagtttgggcac
tctgatagaacaacaaacttggccaatgatcttagacaagctcgtttacgtctttctacc
atagaagaagcagccagaaaggaggttcctctgaatatgtacctcattctgggaattgaa
ccttccgcttcagcatcagaagttaagaaggcatatcgcaaagctgcacttagacaccat
cctgacaaggctggtcactccttggcaagaagtgataatggagatgatagcctgtggaag
gagataggagaagaagtccacaaggacactgacagactttttaaaatgattggggaggca
tatgccatgctttcagaccctgctaagcgtgcacagtatgatcttgaagtgatgaggaat
gatctgaagaaacaaagtggaagcagtacatacagaacacatacagatgctccgaattat
ccatttgaaagaagcagcagtaggagacaatggaaggagggttggaggccctatggcagg
tactga
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