Populus trichocarpa (black cottonwood): 18095326
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Entry
18095326 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18095326
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
18095326
Enzymes [BR:
pop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
18095326
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
18095326
Prokaryotic type
18095326
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
18095326
NCBI-ProteinID:
XP_024457869
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Position
1:complement(35396252..35404952)
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AA seq
529 aa
AA seq
DB search
MAKSLSLLCFLPKPMAFSTTTKATFYPSLFPSKRPTLLNKPIFSLYQNLFSTTSTRYPLQ
YEMIINRPVQPQRPQSRPQPARVTRPDSDSDSTQNPDAELGLDSWVDRKLSQDEMDKSKR
KYYRKRRKRMYGSDSDEENKKNEEGFVELKPEVVEFHRLHKREEELYFYDAFAYPWEKDK
HYKMVYQLEKKYFPDQCLDKAFLDPKDSNNVNQSGKPKKTKSGVKRGEKERDHSGVGEGE
EDKRLVFFDEEEKGERGTDLNDKKDVTERKVEEFFKCLKKVPNKDNEVDTGDPYLSTRNA
LPPRWDGPYGTVVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKA
TKLVDRYQGMVKGYSGAFRLGEATSTWDADSPVIQREPWEHIKDADIKKAAASFRGEIWQ
VPPMFSAIKVGGERMYEKARKGESIELSPRRISIFQFDIERSLEDRQNLIFRVTCSKGTY
IRSLCADFGKALGSCAHLTALRRDSIGEYSAEDAWEFKELEEAITKNYF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatcactttctctgctctgcttccttccaaaaccaatggccttttcaacaaca
acgaaagcaacattctatccttctctctttccctcaaaaagacccactctcttaaacaaa
cctatcttctctctatatcaaaatctcttctccaccacttctactagataccctcttcaa
tatgagatgatcattaaccgcccagttcagccccaacgcccccaatctcggccacaacct
gctcgagtcactagaccagactcagactccgactcaactcaaaacccagatgcagaactt
ggtcttgattcatgggttgatcgaaaactgtctcaagatgagatggataagtctaaaaga
aagtattatagaaagaggaggaaaagaatgtatgggtcagattctgatgaggaaaataag
aaaaatgaagagggttttgtagagttgaagcctgaagttgtagaatttcataggttacat
aagagagaggaggagttatatttttatgatgcttttgcttatccatgggagaaagataag
cattataagatggtttatcaattggagaaaaagtatttccctgaccaatgccttgataag
gcatttcttgatcctaaagactcaaataatgtaaatcaaagtgggaaaccaaagaagacc
aagagtggggttaagagaggagagaaggagagagatcatagtggggttggagagggagag
gaagataaaaggttggttttttttgacgaagaggagaagggtgagagagggactgatttg
aatgataagaaggatgttaccgagaggaaagtcgaggaattctttaagtgtttgaaaaaa
gttcccaataaggataatgaagtggatactggagatccttatctttctacaaggaatgct
cttccaccaaggtgggatggtccttatgggactgtggttttggtgaataagcctaaagga
tggacttcatttacagtttgtggaaagctgcgtcgcctggtcaaagtgaaaaaggtgggg
catgctgggacgcttgatcctatggcaactggtttattgattgtgtgtgttggtaaagcc
acaaagttggtagatagatatcaaggtatggttaagggttatagtggagcgttccgttta
ggggaggctacttcaacttgggatgctgattcaccggttattcaacgtgagccttgggag
cacattaaagatgctgacattaagaaagctgctgcatcatttcgtggggagatatggcaa
gttccaccgatgttctctgcaatcaaagttggaggtgaaaggatgtatgagaaagcaagg
aaaggagaaagcattgagctctcgcctagaagaatttcaatttttcaattcgacatagag
cgaagcttagaggacaggcaaaatttgatcttccgagtgacatgctctaaaggaacatac
attcggtcactctgtgcagattttggaaaggctcttggaagttgtgctcatttaactgct
cttcgaagagattcaattggtgaatattcagcagaagatgcatgggaattcaaagaactg
gaagaggcaataactaaaaattatttctaa
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