Populus trichocarpa (black cottonwood): 18095360
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Entry
18095360 CDS
T01077
Name
(RefSeq) cation-chloride cotransporter 1
KO
K14427
solute carrier family 12 (potassium/chloride transporter), member 4/6
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18095360
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC12: Electroneutral cation-coupled Cl cotransporter
18095360
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Motif
Pfam:
AA_permease
SLC12
AA_permease_2
Na_Ala_symp
NAD_binding_6
Motif
Other DBs
NCBI-GeneID:
18095360
NCBI-ProteinID:
XP_006369978
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Position
1:37229176..37249649
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AA seq
984 aa
AA seq
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MDNGDIEGGGGLEDEFHTNQSGRKYRPVVAHDPAVLEMSSIPPGSSSSNHQSSLKKIIPG
GSTQAKTNTNTGGVNDNSTNGSEREHKLELFGFDSLVNILGLKSMTGEPVAAPSSPRDGE
DGSISFDRDRPRPNDLKLGTMMGVFIPCLQNILGIIYYIRFSWIVGMAGIGESLVLVAFC
GLCTFLTGISLSAIATNGAMKGGGPYYLIGRALGPEIGVSIGLCFFLGNAVAGALYVLGA
VETFLKAVPAAGMFKETITKVNGTDIPHPIQSPSLHDLQIYGIVVTIILCFIVFGGVKMI
NRVAPAFLIPVLFSLLCIFIGIFLTKKDYPADGVTGLSLESFKENWSSDYQFTNNAGIPD
PEGKVFWNFNALVGLFFPAVTGIMAGSNRSASLKDTQRSIPIGTLAATLTTTVLYLVSVL
FFGALATRDKLLTDRLLTATIAWPFPAIIYIGIILSTLGAALQSLTGAPRLLAAIANDDI
LPILNYFKVADGHEPHIATLFTAFLCVGCVVIGNLDLVTPTVTMFLLLCYMGVNLSCFLL
DLLDAPSWRPRWKFHHWSLSLLGALLCIVIMFLISWSFTVVSLALASLIYYYVSIKGKAG
DWGDGFKSAYFQLALRSLRSLGANQVHPKNWYPIPLVFCRPWGKLPENVPCHPKLADFAN
CMKKKGRGMSIFVSILDGDYHEHAEDAKAACKQLSTYIDYKRCEGVAEIVVAPNMSEGFR
GIVQTMGLGNLKPNIVVMRYPEIWRRENLKEIPATFVGIINDCVVANKAVVIVKGLDEWP
NEYQMQYGTIDLYWIVRDGGLMLLLSQLLRTKKSFENCKIQVFCIAEEDSDAEELKADVK
KFLYDLRMQAEVIVISMKSWDAQIEGGSQQDEWLESLTAAQQRIAGYLAEKRSVQGDGDK
LMADGKPVVVNEQQVEKFLYTTLKLNSTILRYSRMAAVVLVSLPPPPVNQPAYFYMEYMD
LLVENVPRLLIVRGYRRDVVTLFT
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggacaacggagatattgaaggtggtggtggtttagaagacgaattccacaccaaccag
agtggtcgcaaatacaggcctgtggtggctcacgatcccgccgtccttgagatgtcctcc
attcctcccggatcctcctcctccaatcaccaatctagcctcaagaaaatcataccagga
ggttccacccaagcaaaaacaaacacgaatactggtggtgtgaatgataatagtacaaat
gggtcagagagggagcacaagttggaattgtttggttttgattcccttgtcaatattctt
ggtcttaagagtatgacaggggagccagtagccgcaccgtccagtcccagggatggtgaa
gatggttctatctcttttgatcgagatcgcccaaggcccaatgaccttaaactgggaaca
atgatgggtgttttcatcccatgcttgcaaaacatacttggaattatctactacattcga
ttttcgtggattgttggcatggctggtataggtgaatctctagtgctggtagctttttgt
ggattgtgtactttcctaacaggaatttcactgagcgctattgcaactaatggtgcaatg
aagggtggggggccatattacctcattggtcgtgcccttggtccagagattggagtgagt
attggattatgtttcttccttgggaatgcggttgctggagctctttatgtactgggagct
gttgaaacctttttaaaagccgtgcctgctgctgggatgttcaaagagaccataacaaaa
gttaatggcacagacattccgcatcccatacaaagtccaagtttacatgacctccaaatt
tatggaattgttgttacaatcatcctatgctttattgtgttcggtggagtgaagatgatc
aatcgagttgcacctgctttcctcattcctgttctgttctcgctgctctgcatatttatt
gggatatttttgacgaagaaggattaccctgccgatggagtcacaggcttgagtttggaa
agttttaaagaaaactggagttctgattatcaatttactaataatgctggaatacctgat
cctgaaggaaaggtcttctggaatttcaatgcattggttggcctatttttccctgctgta
acgggaattatggcaggctctaatagatcagcatcacttaaagacacgcagcgttcaatt
cccattggtacactggctgcaactcttacaactaccgttctatatttagtttctgtgtta
ttctttggagcacttgcaactagagacaagctcttgacggacaggctacttacagctaca
attgcctggcctttccctgccatcatctacattggtatcattctttcaaccttgggtgct
gctcttcaaagcttgacaggagccccacgcctgcttgcagccatagccaatgatgacatt
ctgccaattcttaactatttcaaagttgcagatggacacgagcctcacattgctactctc
tttactgcatttctctgtgttgggtgtgtcgttattgggaatttagatcttgtcacacca
actgtaactatgtttttacttttgtgttatatgggcgtgaacttgtcttgcttcctcctg
gatcttctagatgctcccagctggcgaccacggtggaaatttcaccattggagcctttct
cttcttggagcattactatgcatagtcatcatgttcttgatttcttggtcattcactgtt
gtgtctctggcactagcaagcctcatttattattatgtcagcattaaaggaaaggctggg
gactggggtgatggcttcaagagtgcatattttcaactagctctccgcagtcttcgatca
ctgggagctaaccaagtgcacccaaagaattggtatccaatcccccttgtattctgccgg
ccatggggaaagctgccagaaaatgttccttgccatcccaagcttgctgactttgcaaac
tgcatgaagaagaaaggccgtgggatgtccatatttgtctctatattagatggagactac
catgagcatgctgaagatgctaaggcagcttgtaagcaactaagtacctacattgattac
aagcgttgtgaaggtgtcgcagagatagttgtagcccccaatatgtctgaaggttttcgt
ggaattgtccagactatgggccttggcaacctgaagcccaacattgtggtgatgcggtat
cctgaaatttggcgtcgtgaaaatctaaaagaaataccagccacctttgttggaataatc
aatgactgcgttgttgcaaacaaagcagttgttattgtcaagggtcttgatgagtggccc
aacgagtatcaaatgcagtatggaaccattgacttgtattggattgtaagagatggtggt
ctaatgctgcttctttcccagctccttcgtacaaagaagagttttgagaattgtaagatt
caggtcttctgcattgcagaggaggattcggatgcagaagaactcaaagctgatgtgaag
aagtttctatatgatcttcggatgcaggctgaagtgattgtaatatctatgaaatcctgg
gatgcacaaatagagggtggatctcaacaagatgaatggttggaatcacttacagctgct
cagcagcgcattgctggttatttagctgagaagaggtcggttcagggggatggggataag
ctgatggctgatgggaaacctgtagtcgtgaacgagcaacaggtagagaagtttctttac
acaaccctgaagctaaattctacgatattgagatactcaagaatggctgctgttgtgctg
gtgagtctacccccgcctccagtaaaccaacctgcttacttttacatggagtacatggat
ctattagtagagaatgtgccaaggcttttgattgtaagaggttaccgtagagatgttgta
actctattcacatag
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