Populus trichocarpa (black cottonwood): 18095411
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Entry
18095411 CDS
T01077
Name
(RefSeq) trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1
KO
K12450
UDP-glucose 4,6-dehydratase [EC:
4.2.1.76
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00541
Biosynthesis of various nucleotide sugars
pop01100
Metabolic pathways
pop01250
Biosynthesis of nucleotide sugars
Module
pop_M01021
UDP-L-Rha biosynthesis, UDP-Glc => UDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
18095411
Enzymes [BR:
pop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.76 UDP-glucose 4,6-dehydratase
18095411
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-GeneID:
18095411
NCBI-ProteinID:
XP_006370064
UniProt:
U5GSR1
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Position
1:40286615..40290148
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AA seq
670 aa
AA seq
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MATYTPKNILITGAAGFIASHVCNRLIRNYPDYKIVVLDKLDYCSNLKNLLPSKSSPNFK
FVKGDVGSADLVNFLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV
TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP
VITTRGNNVYGPNQFPEKLIPKFILLAMQGKHLPIHGDGSNVRSYLYCEDVAEAFEVILH
KGEVGHVYNIGTKKERRVIDVAKDICNLFSRDPDTSIKFVDNRPFNDQRYFLDDQKLNNL
GWSEHTTWQEGLRKTMEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEEKDASYVS
NNSNQTRMVIPVSKGSGSGSPRKPSLKFLIYGRTGWIGGLLGKLCEKQGISYEYGKGRLE
DRSSLLSDIQNVRPTHVFNAAGVTGRPNVDWCESHKTETIRTNVTGTLTLADLCREHNLL
MMNFATGCIFEYNAGHPEGSGIGFTEEDKPNFIGSYYSKTKAMVEELLKEYDNVCTLRVR
MPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGVV
SHNEILEMYKNYINPDFTWVNFDLEEQAKVIVAPRSNNEMDASKLKNEFPELLPIKESLI
KYVFEPNKRT
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctacctatactccgaagaacatcctcattactggagctgctgggtttatcgcgtcc
catgtttgcaatcggcttatccgtaactaccctgattataaaatagttgtgcttgacaag
cttgactattgttcaaacctgaaaaatctcctcccttccaagtcatcccctaactttaag
tttgtcaagggtgatgttggaagtgcagaccttgtcaacttcctcctgatcacggagtcg
attgacacaattatgcactttgcagcccagacccatgtggacaactcttttggtaacagc
tttgagttcaccaagaacaacatatatggaactcatgtccttttagaagcttgcaaagtc
actggtcagatcaggaggttcatccatgtgagcacagatgaagtatatggggagactgat
gaagacgctgttgtaggaaatcatgaggcctctcaacttctcccaactaacccctactct
gcaaccaaagctggagcagaaatgcttgttatggcatatggaaggtcatatgggctgcct
gtgataaccactcgtgggaacaatgtttatggtcccaatcagttccctgaaaaattaatt
ccaaagtttattctcttagccatgcaagggaagcatcttcccatccatggtgatggttct
aatgtgagaagttacttgtattgtgaggatgtcgctgaggcttttgaagtcattcttcac
aagggagaggtaggccatgtttacaatatagggacaaagaaggaaaggagagtgattgat
gtagccaaagatatttgcaaccttttctcaagggaccctgatacgagcatcaagtttgta
gacaacagaccattcaatgaccagaggtactttttggatgatcagaagctgaataatttg
ggatggtcagaacatactacatggcaggaggggttgagaaagactatggagtggtacact
caaaatcctgattggtggggtgatgtctctggagccctgcttcctcatccaagaatgctc
atgatgcctggtgggagacattttgatgggtctgaagagaaagatgcttcttatgtctca
aataattcaaatcagacccggatggtgattccagtttcaaaaggaagcggctctggctct
cctcgaaaaccttcgcttaagttcctgatctatggcaggactgggtggattgggggtttg
cttgggaagttgtgtgagaaacaaggaatttcctatgaatatggaaaggggcgcttggaa
gatcgatcctcacttttgtcagatattcagaatgttaggcctacccatgtttttaatgct
gctggggtcactggcaggcccaatgttgattggtgtgaatcccacaagacagaaactata
cgcaccaatgttactggaactctgacattagcagatctttgcagagagcacaacctcctg
atgatgaattttgctacaggctgcatatttgagtataatgctggtcatccagagggttct
ggcattggtttcaccgaggaagacaagcccaatttcattggttcttactattcaaagact
aaggccatggtcgaagagcttttgaaagagtatgacaatgtgtgcaccctcagagttaga
atgccaatatcatcagacctaaacaacccacgcaacttcattacaaagatttctcgctat
aataaggtggtgaacattccaaacagcatgactatcctggacgaacttctacctatttca
attgagatggcaaagaggaacttgagaggcatatggaacttcacaaaccctggtgttgtg
agccataatgagattttggagatgtacaagaactacattaacccggactttacatgggtt
aactttgacctagaggagcaagccaaggtgatagttgccccccggagcaacaatgagatg
gatgcgtccaagctgaagaacgagttccctgagttgctgccaatcaaagagtcattaatc
aagtatgtctttgaacccaacaagagaacctaa
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