Populus trichocarpa (black cottonwood): 18095442
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Entry
18095442 CDS
T01077
Name
(RefSeq) probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X1
Organism
pop
Populus trichocarpa (black cottonwood)
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Ortholog
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GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Malectin
LRR_1
LRR_8
LRR_4
Haspin_kinase
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
18095442
NCBI-ProteinID:
XP_024452182
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Position
3:42514..111151
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AA seq
1035 aa
AA seq
DB search
MAFWPSLLSKTFSVLVFGFVVLNCFAVDKFGSHAQGVLSTPLLPLDEVQILQNISNKLNI
SNWATINRTSCGSAQWNQINDNEIESNVTCDCTFENGSVCHVTRIRVKKFNLNGVLPEEL
GDLPHLLEIDLTRNYISGTIPPRLAQLPKLQILSLIVNRLTGPIPPDIGNITTLEELVLE
DNLLGGPLPPDLGNLTSLRRLLLSANNFTGTIPDTFGNLKNLNDFRIDGSELSGKIPDFI
GNWTNITTLDLHGTSMEGPIPSAISLLKKLTILRISDLKGSSSTFPDLKDMTKMEKLILR
NCSLTGSIQEYLGNMADLDTLDLSFNKLTGQIPGALESLKKNKKFMFLNNNLLTGEVPAW
ILGSRKDLDLSYNNFTGSAEQSCQQLPVNLVASHVSTGSNKISWCLNKDLVCPRKPQYHS
LFINCGGSSETVGDNVYEDDTTPGGAADFASLSERWGYSSTGTYIGTENGAYKATNSYGL
NVTGEGFYLTARLAPQSLKYYGLCMLAGSYKVQLHFAEIMYSNNQTFSSLGRRIFDISIQ
GKVVEANFNIMEQAGGVGIGITKVFDGIIVNGSTLEIHLYWSGKGTTAVPERGVYGPLIS
AITVTPNFKVDNGGGLSVGAIIGIVAAPCVLAALVLLVLRKKGYLGGKDLEDKELRALDL
QTGYFSLRQIKHATNNFDPANKIGEGGFGPVYKGMLSDGSVIAVKQLSAKSKQGNREFVN
EIGMISALQHPHLVKLYGCCIEGNQLLLVYEYLENNSLARALFGRDEHQIKLDWQTRKKI
LLGIAKGLTYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIA
GTIGYMAPEYAMRGYLTDKADVYSFGVVVLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQ
GNLLELVDPSLGSNYSKIEALRMLNLALLCTNPSPTLRPSMSSAVKMLEGQIPVQAPIVK
RSTMNQDARFKAFELLSHDSQTNVSNGSQSSQIQKSISMDGPWTDSEFSIESKDEIIEYS
SSTKLLKDLYHVNLD
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctggccatcactactgtcgaagactttctctgttttggtttttggatttgtg
gtgttgaattgctttgctgtggacaagtttggatcccatgctcaaggagtactcagtact
ccactcttgccattagatgaggtgcaaattcttcaaaacatatccaacaagttgaacatc
agcaactgggccaccatcaatcgaacttcttgcggtagtgcacagtggaaccagatcaac
gacaacgaaattgaaagcaatgttacatgcgactgtacatttgagaatggctccgtctgt
catgtcactcgcataagagtgaaaaaatttaatttgaatggagttctcccagaggaacta
ggagaccttcctcatctgcttgaaattgatctgactcgcaactacattagtggaacaatc
cctccaagacttgctcagctccctaagcttcagattttgtctctcatcgttaaccgtctc
accggcccaattcccccggatataggcaacattaccacactggaggagctggtcctggaa
gataatttgctaggagggcctcttcctccagaccttggaaatttgacaagcttaagaaga
cttcttctttccgcaaacaattttacaggaacaataccagacacatttggcaatttaaag
aatttaaatgattttaggatagatggaagtgaactgtcagggaagatacctgactttatt
gggaactggaccaacattacgacattggatttgcatggaacatccatggagggtcctatt
ccctctgccatttcactgttaaaaaaattaacaattttgagaatatcggatttgaaagga
tccagttcaactttccctgatctgaaagatatgacaaaaatggaaaaactgattctgaga
aattgctcattgactggttcaatccaagaataccttggaaatatggcagacctagatact
ctagatctgagctttaacaagttgacaggccagattcctggcgcattagagagtttgaaa
aaaaataaaaagttcatgtttctgaataacaacttactaactggagaagtgcctgcttgg
atactgggaagcaggaaagacttggatttatcttacaacaattttactggatcagctgag
caaagttgtcaacagctaccagtgaacttagttgctagtcatgtgtcaactgggagcaac
aagatttcttggtgcttgaacaaggaccttgtttgcccaagaaaacctcaataccattcc
ttgttcataaactgtggagggagcagtgagactgttggtgataatgtatatgaagacgac
acaactccagggggggcagctgattttgcatctttatcagaaagatggggttatagcagt
acagggacttatattggcactgaaaacggcgcttacaaagcaacaaattcttatggtctg
aatgtgaccggtgaaggtttttacctaactgctcgccttgcccctcaatcactcaagtac
tatggcctgtgcatgctggcgggcagttacaaagtgcagctccactttgctgaaattatg
tattccaataatcagacttttagcagccttgggaggcggatatttgatatatcaattcaa
gggaaggtagttgaggcaaatttcaatattatggagcaagctggaggtgttggtattggc
atcactaaggtatttgatggtataattgttaatggtagcacactggagatacacttatac
tggtcaggcaaaggtactactgctgttcctgaaaggggtgtctatggacctctcatatct
gccattacagtgactccaaactttaaggtggataatggtggcggattatcagttggagct
attattggcattgtagctgctccatgtgtgcttgcggcattggttttgctggtcctccgg
aagaaaggttacttgggagggaaggaccttgaagataaagaactccgtgctctagatctc
caaactggttatttcagcctaaggcaaattaaacatgcgaccaataattttgaccctgca
aataagataggagaaggaggatttggtccagtttacaagggtatgttgtcagatggttct
gtaattgctgtaaagcagttatcggccaaatcgaaacaaggaaatcgtgaatttgtgaat
gagataggcatgatatctgccttgcagcatccccatctcgtgaagctgtatggttgttgt
attgaaggaaatcagttgttgttagtatatgaatacttggaaaacaatagccttgctcgg
gctctttttggtcgtgatgaacaccagattaaactggactggcaaacaagaaagaaaata
ttgttgggtattgcaaagggattaacttatcttcatgaagagtcaaggctgaagattgta
cacagagacataaaggcaactaatgtgctgcttgataaggatctaaatgccaagatatct
gactttggtttagctaagcttgacgaagaagaaaacactcatattagcacgcggattgct
gggacaataggttatatggctccagaatatgctatgaggggttacttgacagataaagca
gatgtttacagctttggggttgttgttttagaaattgtcagtgggaagagcaacacgaat
tacaggccgaaggaggagtttgtttatcttcttgattgggcctatgtcctgcaagagcaa
ggaaaccttctagagcttgtggatccaagccttggttcaaactactcaaaaatagaggca
ttgcggatgcttaacttggctctcttgtgcaccaacccatctcccactttgaggccatca
atgtcttctgcagtgaagatgcttgagggacaaattccagtccaagctccgatagtcaag
cgcagtaccatgaaccaggatgcaaggttcaaagcctttgagcttctctcacatgatagc
caaacaaacgtctcaaatggatctcaaagcagtcagatacagaagagcatatcaatggat
ggaccgtggacggattctgaattttctatcgaaagtaaggatgagatcatagaatattcc
tcatcgaccaagcttcttaaggatctttaccacgtcaacttagattga
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