Populus trichocarpa (black cottonwood): 18095595
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Entry
18095595 CDS
T01077
Name
(RefSeq) dynein light chain 1, cytoplasmic
KO
K10418
dynein light chain LC8-type
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04145
Phagocytosis
pop04517
IgSF CAM signaling
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
18095595
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
18095595
09142 Cell motility
04814 Motor proteins
18095595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pop03037
]
18095595
04812 Cytoskeleton proteins [BR:
pop04812
]
18095595
Cilium and associated proteins [BR:
pop03037
]
Motile cilia and associated proteins
Dynein arm
18095595
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
18095595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynein_light
Pex14_N
Motif
Other DBs
NCBI-GeneID:
18095595
NCBI-ProteinID:
XP_006370272
LinkDB
All DBs
Position
1:complement(42749367..42750282)
Genome browser
AA seq
163 aa
AA seq
DB search
MDIIKSQRQKEEQAAGLKQHFFTAQNRQEEATLIMAQDRSPTEEVMKLAAIALSLNVRLR
SSDMPVDMQERALRYARSFLDDPSISSAPKHRPNPTLLARALKKEFDSVYGVAWHCVAGN
SFGSFVTHSPGGFMYFSIDSLFIVLFKTEVKMVTELEPSSQIS
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atggatatcattaaatcccaaagacagaaagaggagcaagctgctggcttgaaacaacat
tttttcactgctcaaaacagacaagaagaagcgacattaataatggcccaagataggtct
ccgacagaggaagtcatgaagctagctgccattgcactaagcttaaatgtaaggctaaga
tcttccgacatgccagtcgacatgcaagaacgtgcccttcgctatgcaagatcatttctc
gacgacccatcaatatcatcagctcccaaacaccgccccaatcctaccctccttgctcga
gccctcaaaaaggaatttgactcggtatatggggtggcctggcactgtgtggcggggaac
agttttgggtcgtttgtgactcactcaccaggtgggttcatgtacttctctatcgactcg
ctgtttattgttctcttcaaaacagaggtgaagatggtcacggaattggaaccttcttcc
cagatcagctga
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