Populus trichocarpa (black cottonwood): 18095647
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Entry
18095647 CDS
T01077
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD5
KO
K12486
stromal membrane-associated protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18095647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18095647
Membrane trafficking [BR:
pop04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
18095647
Endosome - Golgi transport
Arf GTPase associated proteins
18095647
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Motif
Other DBs
NCBI-GeneID:
18095647
NCBI-ProteinID:
XP_024444180
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Position
1:43368410..43377278
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AA seq
543 aa
AA seq
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MNEKANVSKELNARHRKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRS
LGVHISKVRSATLDTWLPEQVAFIQSMGNERANSYWEADLPPNYDRVGIENFIRAKYEEK
RWVSKDGKPQSPSSGRDERSSLHWQRPAERSGHGHTSSSENLFEERKNFQVSNSKNSAPA
TRISLPAPPRAFEQVTAPTKPQQVVEKAEPMAEATEAAKKVADAAPVVSPPKVDFATDLF
DLLSMDGPTENGSEAAANDDNSWAGFQSAAVAEEVSTTGNTGPTQAVENDTQSVSGIEDL
FKDSPSLATPSVLEKPQKDVKNDIMSLFEKSNMVSPFAMHQQQLAMLAQQQLLMAAAAKS
AGGDPKAINQQQLAILAQQQQLLMAAAAKSAGGDPQAMNQQQLAILAQQQQLLMATAAKS
AGGDQKLSGSIQQQGPNGISIPAQNWPNIGYQIPGLMMPVAGQGDLQKLKQTADMGLTHP
GGSSVPYPTSSLYNIEQVTPANGGTNNGVGKTQSSSSVSSGTSTPAGKDYDFSSLMQGMF
SKH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagaaggccaacgtctctaaagagctcaatgccaggcacagaaagatattggaa
ggactcctgaaattgcccgagaatagggaatgtgctgactgcaaagccaaaggtccaaga
tgggcaagcgtaaatttgggtatctttatttgcatgcaatgttcagggatccacagaagt
cttggggtacacatatcgaaggttcgatctgcaacccttgacacatggcttccagagcag
gttgcatttattcaatcaatggggaatgagagagcaaatagttattgggaagcagaccta
ccaccgaactacgacagagttggaattgagaatttcattcgtgcaaagtatgaagagaag
agatgggtctctaaagatggaaaaccacaatctccttctagtgggagggatgaaaggtct
tctttgcattggcagagacctgctgaaagaagtgggcatggacacaccagcagttctgaa
aatttgtttgaggaaagaaagaattttcaagtatcaaattcaaaaaacagtgctcctgct
acaagaataagtcttcctgctcctcctagggcatttgagcaggtcactgctccaacaaag
cctcaacaggttgttgaaaaagctgaaccaatggcggaggctactgaagctgcaaagaag
gttgcagatgctgctccagttgtctctccacccaaagttgattttgctactgaccttttc
gacttgctctccatggatggccctactgaaaatggctcggaggcagctgctaatgatgat
aacagttgggcaggttttcaatctgcagcagttgctgaagaagtatcaacaactggaaat
actggtccaactcaagcagtagaaaatgatacccagtccgtttctggaattgaggattta
tttaaagattcaccttctttagcaaccccttcagtcttggagaaaccccagaaagatgta
aaaaatgatataatgagcctttttgagaagtccaatatggtatcaccgtttgcgatgcat
caacaacaacttgccatgctggcacaacagcaacttctcatggctgctgcagcaaaatct
gctggtggggatccaaaagcgataaaccaacagcaacttgctattctggcacagcaacag
caacttcttatggctgctgcagcaaaatctgctggcggggacccacaagcaatgaatcaa
cagcaacttgctatactggcgcagcaacagcaacttcttatggccactgcagcaaaatct
gctggtggggaccaaaaactttcaggcagtattcaacagcaagggccaaatggtattagc
atacctgcacaaaactggccaaatattggataccaaatccctggtttgatgatgccagta
gctgggcagggtgacttacagaaacttaagcagactgctgacatgggactgacacatcct
gggggaagctctgtaccatatccaacatcgagcctttataacattgagcaagttacccct
gctaatggtgggacaaacaatggagtcgggaaaactcaatcgtcatcctcggtctcatct
ggtacttcaacaccagccgggaaggattatgacttctcctccttaatgcaaggcatgttc
tcaaagcattga
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