Populus trichocarpa (black cottonwood): 18095668
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Entry
18095668 CDS
T01077
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
18095668
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
18095668
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18095668
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
18095668
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
18095668
Ubiquitin system [BR:
pop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
18095668
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18095668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_DHX29
UBA_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
18095668
NCBI-ProteinID:
XP_006370358
UniProt:
B9N564
LinkDB
All DBs
Position
1:complement(43650557..43659941)
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AA seq
807 aa
AA seq
DB search
MDLLRSNLSRVRIPEPTNRIYKQECCVSFETPRSEGGLFVDMTTFLAFGKDYVGWNYEKT
GNPVYLHIKQTRKVVPEDRPLKKPTLLAIGVEGGFDNNEPEHEENHNIVILPDYVTLPFP
SVELPEKVRLAVDAIIMAEGAERKEQLAAWIAADKKQVSAYAMSLPQIDNGVVIPPSRWK
CAKCDKKDNLWLNLTDGMILCGRKNWDGTGGNNHAIEHYKETSYPLAVKLGTITADLEAA
DVFSYPEDDSVVDPLLAQHLAFFGIDFSALQKTEMTTAERELDQNTNYDWNRIQESGQDV
EPIFGPGYTGLVNLGNSCYMAATMQVVFSTRSFNSRFYINQSLKMAFEMAPADPTVDLNM
QLTKLAHGMLSGKYSVPALENDDKANAVTSTSNKQEGIPPRMFKAVIAASHPEFSSMRQQ
DALEFFLHFLDQVERVNGGKPALDPSRSFKFGIEERISCPSGKVGFNRRLDYILSLNIPL
HEATNKEELEAFGKLKAEKTSEGKDLSSDEIVRPRVPLEACLANFSAPEEIQDYYSTALK
AKTTALKTAGLTSFPDYLVLHMRKFVLEEGWVPKKLDVYIDVPDIIDISYMRSKGLQPGE
ELLPDDVPEAEVESNMPLANEDIVSQLVSMGFNYLHCQKAAINSSNAGVEEAMNWLLSHM
DDPDIDAPVSQGAHGNEVVDQLKVDTLLSFGFQEEIARKALKASGGDIEKATDWIFNNPD
ASVSSDMDTSTSSSKPTPDDTELPDGGGKYKLFGIVSHMGTSTHCGHYVAHILKDGRWAI
FNDSKVAVSVNLPKDMGYLYFFERLDS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggacctgctccgatcaaatctctcacgggttcggatccccgaaccaactaatcgcatc
tacaagcaggagtgctgcgtctctttcgaaactccgaggtctgaaggcgggttgtttgtc
gacatgactacgtttcttgcttttgggaaagattatgtgggttggaattatgagaagact
ggaaacccggtttatttacacataaagcaaacaaggaaggtggtccctgaagataggcct
ttgaagaaaccaactcttttggctataggtgttgaagggggatttgacaacaatgaacct
gaacatgaagaaaatcacaatatagtgatattacctgattatgttactttaccattccct
tcagtggagttgccagagaaggtgaggttggcagttgatgctatcataatggctgaaggt
gctgagaggaaagagcaacttgctgcctggatagctgctgataagaagcaagttagtgca
tatgcaatgagtttaccacagattgacaatggtgttgttattccaccatccaggtggaaa
tgtgcgaagtgtgacaaaaaagataatttgtggctaaatcttactgatggaatgattctt
tgtgggcgaaaaaattgggatggaactggaggcaacaaccatgccattgaacattacaag
gagacaagctaccctcttgctgtgaagcttgggacaattactgctgatctcgaagcagca
gatgttttctcttatccagaggacgatagtgttgtggacccacttttagcacaacatctg
gcattttttggcattgatttttcagccttacaaaagactgaaatgacaactgctgagagg
gaacttgaccagaacaccaactatgattggaaccgaattcaagaaagtggacaggatgtg
gaacccatttttggaccaggttatacaggacttgtgaatcttggaaacagctgctacatg
gccgcaacgatgcaagttgtgttttcaactcggtccttcaattcacgattctacattaac
caaagcttgaaaatggcatttgagatggctcctgctgatccaactgtagacttgaatatg
cagcttacaaagctggcacatggtatgctttctggaaagtactcggttccagcactggag
aatgatgataaagctaatgccgttacctcaacaagcaataaacaggaaggtataccccct
cgtatgttcaaagcagttattgctgccagccatcctgagttttcttctatgaggcaacag
gatgcattggaattcttcctacactttcttgaccaagttgagcgtgttaatggtgggaaa
cctgcattggatccttcaagaagcttcaagtttggaattgaagaacgtatctcgtgtcca
tctggaaaagttgggttcaatagaaggcttgactatattctttctttgaatattccacta
catgaagctactaataaagaagaactggaagccttcggcaaattgaaagcagaaaagact
tctgaaggaaaggatttgtccagtgatgaaattgtacgtccaagggttcccctagaagca
tgcctagctaatttttcagccccagaggagatacaagattattatagcactgccttgaag
gctaagacaacagcactgaagactgctggtctaacttcattccccgattatttggtgttg
cacatgcggaaatttgttttggaggaaggctgggtgcccaaaaagcttgatgtctacata
gatgttcctgatatcatagacattagctacatgcgaagcaaaggccttcaaccaggggag
gagttgttaccagatgatgtccctgaggcagaggtggaatcaaatatgcctttggccaac
gaggatattgtttcccagcttgtctccatgggtttcaactatcttcattgccagaaagct
gctataaattcatcaaatgctggagtagaagaggctatgaattggttactttctcacatg
gatgacccagatatagatgctcctgtttcccagggcgcacatggtaatgaagtcgtggat
caattgaaagttgatactttactctcatttggttttcaagaagaaattgctcggaaggca
ctgaaggcttcgggtggtgacattgaaaaggccactgattggatattcaacaatcctgat
gcttctgtttcatctgacatggacacttccacatctagctctaaacctactccagatgat
actgagctgcctgatggcggagggaaatacaaactttttgggatagtgagccacatggga
acctccacccactgtggacactacgttgctcacatactgaaagatggcagatgggcaatc
ttcaatgacagcaaggttgcagtctccgtaaacctccccaaggacatgggatatttgtac
ttctttgagaggcttgacagctga
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