Populus trichocarpa (black cottonwood): 18095865
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Entry
18095865 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18095865 isoform X1
KO
K24742
WD repeat-containing protein 25
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pop04990
]
18095865
Domain-containing proteins not elsewhere classified [BR:
pop04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
18095865
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_VPS8
eIF2A
WD_LRWD1
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
18095865
NCBI-ProteinID:
XP_024452061
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Position
1:44237254..44241195
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AA seq
435 aa
AA seq
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MDLLCHAYSNSSDEEPEPEPESESKPEYGPEFRPFIPPPPKRFKPETPSQNFRTEAPVPG
RYISKRERALSAQSPRVPNPATNPNLNPNPPVVASPVLGSISDSEIPRDVLSSLRQAKGR
ASLSQIPKRLAVDLRSHTKAVNALDWSPSHAHLLASAGMDQTVCVWNVWSRDQKIARLFR
YHNAAVKDVKWSPQGLSVLSCGYDCSSRLIDVEKGIETQIFKEDQVVGVIKFCPDNSNIF
LSGGSKGCLRLWDIRNGNVVREYIRGLGPILDVEFTINGKQFISSSDVSGSNLSENSIIV
WDVSRQVPLSNQVYVEAYTCPSVRCHPFEPCFVAQSNANYIAIFSSSPPFRLDKYKRYES
HGVSGFPVKCNFSLDGEKLVSGSSDGCIYIYNYRSSELIRKIKVYEQACIDVVFHPVLPN
VIGSCSWNGDVSIFE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctctgccacgcatactctaattcctcagatgaagaacccgaacccgaaccc
gaatccgaatccaaacccgaatacggacccgaattcagacccttcatcccccctcctcct
aaacgtttcaaaccggaaaccccatctcaaaatttccgaacagaagctccggttcctggc
agatacatatccaagcgtgaacgagctctctctgcccaatcccctcgggtccccaacccg
gcaacaaaccccaacctgaacccgaacccccctgtcgtggcttctcctgttctgggaagt
attagtgattcggagataccccgtgatgttttatcatcattgagacaagcaaagggccgt
gcatcgctaagtcaaatacccaaaaggctggcggttgatttgcgtagccatacgaaggct
gtcaatgctttagattggtctccaagtcatgctcatctccttgcttctgccggaatggat
caaactgtctgtgtatggaacgtgtggagccgagatcagaaaatagcacgcctatttaga
tatcataatgcagcagttaaagatgtgaaatggtcgccacagggactatccgtgctttct
tgtggatatgactgctcatccaggttgattgatgttgaaaaggggatagagactcagatt
ttcaaggaagatcaggttgttggagtaataaagttctgtccagataactccaacatcttc
ctttctggcggatcaaagggctgtctcagattgtgggatattagaaatggtaatgtggtt
cgtgaatacattcgaggtctaggtccaatacttgatgttgaatttaccatcaatggcaag
cagtttatctcatccagtgatgtctctggaagcaatctcagtgaaaattcaattattgtt
tgggatgtctcacggcaggttccattgtccaaccaggtttatgtggaagcctatacatgt
ccaagtgttaggtgccatccattcgagccatgtttcgttgcccagtccaatgcaaattat
attgctatcttctcttcaagtccacctttcaggctggacaagtataaaaggtatgaaagc
catggtgtctctgggttccccgttaaatgcaattttagcctggatggtgagaagcttgtc
tccggctcgtcagatggttgtatatacatatacaactacaggtcatcagagcttatcaga
aaaatcaaggtgtatgagcaagcatgcatagacgttgttttccacccagttttgccaaat
gtaattggttcatgcagttggaatggggatgtttcaatatttgagtga
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