Populus trichocarpa (black cottonwood): 18096114
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Entry
18096114 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18096114
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
18096114
Enzymes [BR:
pop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
18096114
Ribosome biogenesis [BR:
pop03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
18096114
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
WH_Egal
Motif
Other DBs
NCBI-GeneID:
18096114
NCBI-ProteinID:
XP_024449853
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All DBs
Position
2:complement(2031479..2034482)
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AA seq
192 aa
AA seq
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MDENIPVTPIPGPCGVVSALSASGLATNEFTFVGFLPRHGPSRKERLMASANEARTQIFY
VLPHKFSQFLKEFSSLFGVSSFGGALWWRQKNQQPKEEMTLLIEGRTNCSVETPSEVQLE
HELRELISCGHTLSTVMAYLIRDAMHQCCINSFPTQMLLKLTTWNPVSFDVLKLDELLNC
DWFLLGQNIVAS
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaatattccggttaccccaattccgggaccttgtggtgttgtttccgcgctt
tccgcttcaggcttggctactaatgagtttacattcgttggatttcttcctaggcatggt
ccatccaggaaagagaggctgatggcttctgcaaatgaagcaagaacacaaatattctat
gttcttccacacaagttttctcagtttctcaaagaattttcatcgctttttggtgtgtcg
agttttggtggggcactctggtggaggcaaaagaatcaacaacctaaggaggagatgaca
ctgctaattgaaggcaggacaaactgttcggttgagactccgtcagaagttcagcttgag
catgaattgagagaattgatctcctgtgggcatactctatctacggtgatggcctatttg
atcagagatgcaatgcatcagtgttgcataaattcattccccacacaaatgcttctgaag
ttgacaacgtggaatccagttagctttgatgtcttaaaacttgatgagctactgaattgt
gactggtttttattgggacaaaatattgttgcaagctag
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