Populus trichocarpa (black cottonwood): 18096176
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Entry
18096176 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18096176
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
18096176
Enzymes [BR:
pop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
18096176
Ubiquitin system [BR:
pop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
18096176
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
UIM
Acetyltransf_11
Motif
Other DBs
NCBI-GeneID:
18096176
NCBI-ProteinID:
XP_006386311
UniProt:
U5GKU2
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Position
2:4797384..4805212
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AA seq
627 aa
AA seq
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MADQEEEELRVALRMSMQNSPPEPKRSKPRDAGAPAASPEESRRMQRELMAAAAEKRMIA
TRIASPSPSLSHSPSPSPSPSPSPSPSPSKATIDRNPGKSADCVRKEVNFGAKEGNSGLE
LSSEEVNQLFSMVFGSGVSKDILAQWSNQGIRFSPDPETSMGLVQHEGGPCGVLATIQAF
VLKYLLFFPNEIGKVTSNAPQNLGPGRLSKGQYVASDNFGSLTEDAKARALVKSMGEILF
MCGDNKRAVIATLNVVGLDTKGFAKNEIVAKALEGLSIESAFDLQKILRIETHTSQASAL
QKLHKALPVFQSRMGALLFLISALLSRGLDSIQSDRDDPSLPLVTAPFGHASQEIVNLLL
CGQAVPNVFDGRMDLGGGMFLKGIFTSVEVGFLTLLESLNFCKVGQHLKCPKWPIWVVGS
ESHYTVLFALDTTVQDENELEERESQIRRAFDAQDQSGGGGFISVEGFHQVLREAGIRLP
SEKLDHLCSTGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLYHFNGIAKSDLNGS
HTTSGGETPVQRPRLTKLRVSVPPRWTPEEFMADVVVTSGPVGNESSGKDTEVTKPEPSQ
HAPLVDCIRTRWSRAVCNWVGDPPSIV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaagaagaagaggagttgagagtggctctaagaatgagcatgcaaaactcg
cctcctgaacctaagcgaagcaagccgagagacgctggagctcctgcggcgtcaccagag
gaatcgaggcggatgcaacgagagctcatggcagcggccgctgagaagcggatgatcgcg
acgagaattgcctccccttctccttcgttgtcgcattcgccttctccttctccttcacct
tcaccttcaccttcaccttcaccttcgaaagcaacaattgatagaaatcctggtaaaagt
gcggactgtgttagaaaggaggtgaattttggtgcgaaggaggggaattcgggactggaa
ttatcgagtgaggaagttaatcagttgttttcgatggtgtttgggagcggagtttcgaag
gacattcttgctcagtggagtaaccagggcataaggtttagtcctgatccagaaacatct
atgggcctagtgcagcatgaaggcgggccctgtggcgtcttagcaactatacaagcattt
gttctcaaataccttcttttctttccgaatgaaataggcaaagttacatcaaatgcgcca
caaaatttaggccctggaagattgtctaaaggccaatatgttgcatcggataattttggt
tctctcactgaagatgcaaaagcaagagccctggtcaaaagcatgggcgagatattgttt
atgtgtggggataataaaagagctgtgattgccactttgaatgttgttggccttgacacc
aagggctttgcaaagaacgagattgttgcaaaagcacttgagggtctttcaattgaatct
gcctttgatttgcaaaaaattctaagaatcgaaacacatacatcacaagcaagtgcattg
cagaagctccataaggcacttcctgttttccaatctcgtatgggggcactactgttcctt
atttctgcattactgtcccggggattggactccattcaatctgacagggacgatcccagc
cttcccctagtcactgcaccttttgggcatgcttcacaggaaattgtgaaccttttgctc
tgtggacaggctgtccctaatgtatttgacggtaggatggacttgggtggaggcatgttt
ctaaagggcatattcacgagtgtggaagttggatttctcactctactagaatccctcaat
ttttgtaaggttggccagcatctaaaatgccctaaatggccaatatgggttgtaggaagt
gaatcccattatacagttctatttgctctcgacaccactgttcaagatgagaatgagctg
gaagaaagggaatcacagatccggagggcatttgatgcacaagatcagagtggcggcggt
ggctttatcagtgttgaaggtttccatcaagtccttagggaagcaggaattagacttcca
tccgagaaacttgatcacctttgcagcactggctttattgtatggagtgagttctggcag
gttattttggacttggacaaaagtttgggaggccttaaggattcaagtgggttaatgggt
aagaaggtgtttgatctttaccattttaatgggattgcaaaatctgatttaaatggaagc
cacacaacctctgggggtgaaacaccagttcagagacctaggctcacaaaattgagggtt
tcagttccaccaaggtggactcccgaggaattcatggcagatgtggtagtgacttctggg
cctgttgggaacgaatcaagtggtaaagacactgaggtgacaaaacctgagccttcccag
catgcaccactggtggactgtattagaacacgctggtcgcgtgcagtttgcaattgggtg
ggggatccgcctagtatagtgtga
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