KEGG   Populus trichocarpa (black cottonwood): 18096204
Entry
18096204          CDS       T01077                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03030  DNA replication
pop03410  Base excision repair
pop03420  Nucleotide excision repair
pop03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    18096204
   03410 Base excision repair
    18096204
   03420 Nucleotide excision repair
    18096204
   03430 Mismatch repair
    18096204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pop03032]
    18096204
   03036 Chromosome and associated proteins [BR:pop03036]
    18096204
   03400 DNA repair and recombination proteins [BR:pop03400]
    18096204
DNA replication proteins [BR:pop03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    18096204
  DNA Replication Termination Factors
   ELG1-RFC complex
    18096204
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    18096204
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     18096204
  Check point factors
   HRAD17(Rad24)-RFC complex
    18096204
SSDB
Motif
Pfam: RCF1-5-like_lid Rep_fac_C AAA_assoc_2 DUF3853
Other DBs
NCBI-GeneID: 18096204
NCBI-ProteinID: XP_024449077
LinkDB
Position
2:5634088..5638520
AA seq 143 aa
METFSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEITSSRILHICNEEGLTLDGEA
LSTLSSISQGDLCRAITYLQGAARLFGSSISSEDLISVSGAIRQEVTEALYEACKSGDFD
LANKEVNNIIAEGYPVSQILAQA
NT seq 432 nt   +upstreamnt  +downstreamnt
atggaaactttctccaaagttacaagattcttcttcatatgtaattacatcagcaggatc
atagagccacttgcgtcaagatgtgcaaaattcaggttcaagccactttcagaagaaatc
acaagcagtcgtatattgcacatttgtaatgaagaaggcctcactctggacggagaggct
ctctcaaccttgagttctatctcacaaggtgatctttgccgggctatcacatacttgcaa
ggagctgctcgcctatttggatcgtcaatttcatccgaagaccttataagtgtatctggg
gccattcggcaagaggttactgaggcactttatgaagcatgcaaaagtggtgactttgat
ttggcgaacaaggaagtcaataatataattgcggaaggatatccagtatctcagatcctt
gctcaggcatga

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