KEGG   Populus trichocarpa (black cottonwood): 18096210
Entry
18096210          CDS       T01077                                 
Name
(RefSeq) metal transporter Nramp5
  KO
K21398  natural resistance-associated macrophage protein 2
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04142  Lysosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome
    18096210
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pop02000]
    18096210
Transporters [BR:pop02000]
 Solute carrier family (SLC)
  SLC11: Proton-coupled metal ion transporter
   18096210
SSDB
Motif
Pfam: Nramp
Other DBs
NCBI-GeneID: 18096210
NCBI-ProteinID: XP_006386365
LinkDB
Position
2:5665695..5669771
AA seq 552 aa
MAGIQQQQLVNDTLPASWDGSSKRTAAVNVEGHPRPYIDHELKDPSHQKSGWRKFLSYVG
PGFLVSLAYLDPGNLETDLQAGANHGYELLWVVLVGLIFALTIQSLAANLGVSTGKHLSE
LCRAEYPRHVKYCLWLLAEIAVMAADIPEVIGTAFALNILFNIPVWSGVLCTGCSTLLLL
GLQKYGVRKLELLIAVLVFVMAACFFGEMRYVKPPATDVLKGMFIPKLSGQGSTGDAIAL
LGALVMPHNLFLHSALVLSRKTPNSVRGINDACRYFLIESGLALFVAFLINLAVISVSGT
VCSAQNLSSENADRCGDLTLNSASFLLQNVLGKSSSKIYAIAVLASGQSSTITGTYAGQY
IMEGFLELRMRKWIRNLVTRCIAITPSLIVSIIGGSSGAGRLIIIASMILSFELPFALIP
LLKFSSSTTKMGPHKNSIYIIVLSWILGLGIIGINIYYLSTGFVGWLIDNNLPKVANVFI
GIIVFPLMAIYILAVIYLTFRKDTVVTFMEPNKNDPQQQTNMENGLAKSTEGPEMVDRAP
YREDLADIPLPE
NT seq 1659 nt   +upstreamnt  +downstreamnt
atggcaggcattcagcagcaacagctagtaaatgatacattgccagcatcatgggatgga
tcaagcaaacgaacagcagctgttaatgtggaggggcatcctcgaccttatattgatcat
gagcttaaagacccaagtcaccagaaatctggatggaggaagtttctatcatatgtagga
cctggtttcctcgtttcattggcttatcttgaccctggaaatttggagactgatctgcaa
gcaggagctaatcacggatatgagctgctatgggtagtgcttgtcggattgatctttgct
ctcacaatccaatcactcgctgcaaaccttggtgtcagcaccggaaagcacctgtcggag
ctatgcagagctgagtacccacgacatgtcaagtattgcctgtggttgctagcagagata
gctgtcatggctgccgatatccccgaagtgattgggacagcttttgccctaaacatattg
tttaatatcccagtatggtctggagttctatgcactggttgtagcactctgctactcctc
ggcctgcagaaatatggtgtgaggaagctagagctgttaatagcagtgctcgtgtttgtt
atggcagcatgtttctttggagaaatgagatatgtaaagcctcctgcaactgatgtgctt
aagggcatgtttatccccaagctgtcaggccaaggatccactggcgatgccattgcccta
ctcggtgcccttgtcatgccgcacaatctctttctccactctgcccttgttctgtctagg
aaaacaccaaactctgtccgtggcattaacgatgcttgtcgctatttcctgatagagagt
gggctcgcgctgtttgtagcatttttaatcaatctcgcagtcatctccgtatctgggact
gtttgctcagctcaaaatctatcatctgaaaatgcggatcgatgtggagatctcaccctt
aactctgcttccttccttcttcagaatgtgttgggaaaatcaagctcaaaaatttatgcc
attgctgtattagcttcagggcagagctccactatcacgggcacttacgcaggacaatac
atcatggagggtttcttggaacttaggatgagaaaatggattaggaacctagtgactaga
tgcattgccattacacctagtcttattgtctccattatcggtggatcgtcaggcgcgggt
cgactaatcatcattgcatcgatgattctttcttttgaactgccgttcgctcttatccca
cttcttaaattcagtagcagcaccaccaagatggggccacacaagaactcaatctatatt
atagtgttatcatggattctgggtctgggaattattggcatcaacatttattatctaagc
acaggctttgtgggttggctaattgacaacaatctaccaaaagttgcgaacgttttcatt
ggaattatagtatttcctctgatggcaatctatatccttgcagtaatctatttaaccttc
agaaaggacactgtggtgacttttatggagccaaataagaatgacccccagcaacaaact
aacatggagaacggactagccaaatctaccgagggcccggagatggtggatcgtgcacca
tatagagaggatttagctgatatccctctgccagaatag

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