Populus trichocarpa (black cottonwood): 18096210
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Entry
18096210 CDS
T01077
Name
(RefSeq) metal transporter Nramp5
KO
K21398
natural resistance-associated macrophage protein 2
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
18096210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18096210
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC11: Proton-coupled metal ion transporter
18096210
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Gene cluster
GFIT
Motif
Pfam:
Nramp
Motif
Other DBs
NCBI-GeneID:
18096210
NCBI-ProteinID:
XP_006386365
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Position
2:5665695..5669771
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AA seq
552 aa
AA seq
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MAGIQQQQLVNDTLPASWDGSSKRTAAVNVEGHPRPYIDHELKDPSHQKSGWRKFLSYVG
PGFLVSLAYLDPGNLETDLQAGANHGYELLWVVLVGLIFALTIQSLAANLGVSTGKHLSE
LCRAEYPRHVKYCLWLLAEIAVMAADIPEVIGTAFALNILFNIPVWSGVLCTGCSTLLLL
GLQKYGVRKLELLIAVLVFVMAACFFGEMRYVKPPATDVLKGMFIPKLSGQGSTGDAIAL
LGALVMPHNLFLHSALVLSRKTPNSVRGINDACRYFLIESGLALFVAFLINLAVISVSGT
VCSAQNLSSENADRCGDLTLNSASFLLQNVLGKSSSKIYAIAVLASGQSSTITGTYAGQY
IMEGFLELRMRKWIRNLVTRCIAITPSLIVSIIGGSSGAGRLIIIASMILSFELPFALIP
LLKFSSSTTKMGPHKNSIYIIVLSWILGLGIIGINIYYLSTGFVGWLIDNNLPKVANVFI
GIIVFPLMAIYILAVIYLTFRKDTVVTFMEPNKNDPQQQTNMENGLAKSTEGPEMVDRAP
YREDLADIPLPE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcattcagcagcaacagctagtaaatgatacattgccagcatcatgggatgga
tcaagcaaacgaacagcagctgttaatgtggaggggcatcctcgaccttatattgatcat
gagcttaaagacccaagtcaccagaaatctggatggaggaagtttctatcatatgtagga
cctggtttcctcgtttcattggcttatcttgaccctggaaatttggagactgatctgcaa
gcaggagctaatcacggatatgagctgctatgggtagtgcttgtcggattgatctttgct
ctcacaatccaatcactcgctgcaaaccttggtgtcagcaccggaaagcacctgtcggag
ctatgcagagctgagtacccacgacatgtcaagtattgcctgtggttgctagcagagata
gctgtcatggctgccgatatccccgaagtgattgggacagcttttgccctaaacatattg
tttaatatcccagtatggtctggagttctatgcactggttgtagcactctgctactcctc
ggcctgcagaaatatggtgtgaggaagctagagctgttaatagcagtgctcgtgtttgtt
atggcagcatgtttctttggagaaatgagatatgtaaagcctcctgcaactgatgtgctt
aagggcatgtttatccccaagctgtcaggccaaggatccactggcgatgccattgcccta
ctcggtgcccttgtcatgccgcacaatctctttctccactctgcccttgttctgtctagg
aaaacaccaaactctgtccgtggcattaacgatgcttgtcgctatttcctgatagagagt
gggctcgcgctgtttgtagcatttttaatcaatctcgcagtcatctccgtatctgggact
gtttgctcagctcaaaatctatcatctgaaaatgcggatcgatgtggagatctcaccctt
aactctgcttccttccttcttcagaatgtgttgggaaaatcaagctcaaaaatttatgcc
attgctgtattagcttcagggcagagctccactatcacgggcacttacgcaggacaatac
atcatggagggtttcttggaacttaggatgagaaaatggattaggaacctagtgactaga
tgcattgccattacacctagtcttattgtctccattatcggtggatcgtcaggcgcgggt
cgactaatcatcattgcatcgatgattctttcttttgaactgccgttcgctcttatccca
cttcttaaattcagtagcagcaccaccaagatggggccacacaagaactcaatctatatt
atagtgttatcatggattctgggtctgggaattattggcatcaacatttattatctaagc
acaggctttgtgggttggctaattgacaacaatctaccaaaagttgcgaacgttttcatt
ggaattatagtatttcctctgatggcaatctatatccttgcagtaatctatttaaccttc
agaaaggacactgtggtgacttttatggagccaaataagaatgacccccagcaacaaact
aacatggagaacggactagccaaatctaccgagggcccggagatggtggatcgtgcacca
tatagagaggatttagctgatatccctctgccagaatag
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