Populus trichocarpa (black cottonwood): 18096211
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Entry
18096211 CDS
T01077
Name
(RefSeq) metal transporter Nramp5
KO
K21398
natural resistance-associated macrophage protein 2
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
18096211
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18096211
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC11: Proton-coupled metal ion transporter
18096211
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GFIT
Motif
Pfam:
Nramp
Motif
Other DBs
NCBI-GeneID:
18096211
NCBI-ProteinID:
XP_006386366
UniProt:
U5GKY6
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Position
2:5670866..5675312
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AA seq
546 aa
AA seq
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MASSQQEQQACEIAPASRGNSNRIAALNLDGQSPPCIDDYDQQKPGWRKFLPYVGPGFLV
SLAYLDPGNLETDLQAGANHGYELLWVILIGLIFALIIQSLAANLGVSTGRHLAELCKAE
YPKYVRWSLWLLAEVAVIAADIPEVIGTAFALNILFHIPVWAGVLMTGLSTLLLLGLQKY
GIRKLELLISALVFTMAACFFGELSYVKPPASGVLKGLFIPKLSGQGATGDAIALLGALV
MPHNLFLHSALVLSRKVPNSVRGINDACRYFLIESGFALFVAFLINVSIISVSGTVCLAK
NLSPENADQCGDLTLKGASFLLKNVLGKSSSTIYAIALLASGQSSTITGTYAGQYIMQGF
LDLKMRKWLRNLTTRCIAILPSLFVSIIGGSSGASRLIIIASMILSFELPFALIPLLKFS
SSNPKMGPHKNSIYIIVISWTLGFMIIGINVYYLSTGFVGWLTHNNLPKVGNVIIGIIVF
PLMAIYILAIIYLTFRKDTAVTYIDPVKNDPNLEANMENGQGKSNQEMAFGRVPYREDLA
DVPLPE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcaagctcacagcaggaacagcaagcgtgtgagattgctccagcatcacggggaaac
agcaatcgtatagcagctcttaacttggatggccagtccccaccttgcattgatgattat
gaccagcagaaacccggatggagaaagttcctcccctacgtcggacccggttttcttgtt
tcattagcttatctggatcctggaaacttggaaacagatttgcaagcaggagccaaccat
ggatacgagctgttatgggtgatccttattggtttgatcttcgctctcataatccaatcc
cttgctgcaaatcttggtgtgagcaccggcagacacctagctgagttgtgcaaggctgaa
tatccaaagtacgtgagatggagcctgtggttgctagcagaggtagctgtcatagctgct
gatatacctgaagtcattggaacagcctttgcgttaaacatactattccacatccccgta
tgggcaggagttctcatgactggtcttagcactctcctgcttcttggtctccaaaaatat
gggatcaggaaactggagctgctgatatcagcgttggtgtttacaatggcagcatgtttc
tttggtgaacttagttatgtaaagcctccagcatctggtgtgctgaaaggcttgtttatc
cctaaactgtcaggccaaggagccactggtgatgccattgctctactcggtgcccttgtc
atgccgcacaacctctttcttcattccgctcttgtgctttctaggaaagtgcccaattct
gttcgtggcatcaatgatgcatgtcgatatttcctgatagaaagcggatttgcactattt
gtagcatttttaatcaatgtatcgattatctctgtatcgggtactgtttgcttggccaag
aatctctcacctgaaaatgctgatcagtgcggtgatctcaccctcaagggtgcttctttc
ttactcaagaatgtgctgggaaagtcaagttcgaccatttatgccattgcgttattagcc
tcgggacaaagctctacaataacaggcacttacgctggacaatacatcatgcagggtttc
ttggatttgaagatgagaaaatggcttaggaacctaacgactagatgcattgccatttta
ccaagtctctttgtctcaattataggtggatcatccggggcaagccggttaatcatcatt
gcatcgatgatattgtcatttgagctcccatttgcactcatcccacttcttaaattcagc
agcagtaaccccaagatgggaccgcacaagaactcaatttatataattgtcatctcgtgg
actctgggattcatgatcattggaatcaatgtgtattatctaagcacgggatttgtgggc
tggctgactcataacaatctgcccaaagttggaaatgtgattatcgggatcatagtcttt
cctttgatggcaatatatattcttgctatcatctacctaacctttagaaaagacactgct
gtgacatacattgacccagtgaagaatgatccaaatcttgaggctaacatggaaaatggg
caaggaaaatctaaccaggaaatggcattcggtcgggtaccttacagagaggatttagct
gatgtcccactgccagagtag
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