Populus trichocarpa (black cottonwood): 18096550
Help
Entry
18096550 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18096550 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
18096550
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18096550
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18096550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-rbx1
zf-Nse
Prok-RING_4
TerY_C
zf-ANAPC11
Rtf2
Zn_ribbon_6
zf-RING_10
zf-RING_6
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
18096550
NCBI-ProteinID:
XP_024450084
LinkDB
All DBs
Position
2:23663637..23666033
Genome browser
AA seq
212 aa
AA seq
DB search
MSGQTQGVKSPPLRGYRRRKTVLDLNVPPIDGRDDEGTSTTRIEPPQGVQASHQRNGQGP
SLPPPTIDVDAIDDDDDDVIESSPRAFAQAKNNSRRALVVDVESGGRFTHNKRRRVPPNQ
TIINCDLYINLEGGSSSSSSKRENVQTLPPKEPTFNCPICLCPLVEEMSTKCGHIFCKAC
ISDAIKRQAKCPTCRKRVTTKELIRVFLPATS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccagactcagggcgtgaagagtcctcctttaagaggatatcggcgaaggaag
accgtgctggacttaaacgttcctccgattgatggaagagatgacgaagggacttcgacc
acccgcattgaacctcctcaaggagtgcaagcaagccaccaacgaaacggacaaggaccg
tctttgccgcctcctactattgatgttgatgctatcgacgacgacgacgacgacgtcatc
gaatcgtcgcccagagcgtttgctcaggctaagaacaattcccggagggctttggtcgtt
gatgtagagtcaggtgggcgattcactcacaataagcgtagaagggttccgccgaatcaa
acgatcatcaattgtgatctttatatcaacttggaaggcggaagtagcagcagtagctct
aagagggagaatgtgcagaccctgccgccaaaggagccaaccttcaactgcccgatttgc
ttgtgtccattggtcgaggagatgtcaacaaaatgcggacacattttctgtaaggcttgc
atatcagacgcaatcaaaagacaggccaaatgccctacttgtaggaaaagagtcactact
aaagagcttattagagtgttcctcccagcaaccagttga
DBGET
integrated database retrieval system
