Populus trichocarpa (black cottonwood): 18096594
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Entry
18096594 CDS
T01077
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
18096594
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18096594
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
18096594
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18096594
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
18096594
Ion channels [BR:
pop04040
]
Chloride channels
Chloride channel (CLC)
18096594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
18096594
NCBI-ProteinID:
XP_006385193
LinkDB
All DBs
Position
3:complement(427856..433945)
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AA seq
769 aa
AA seq
DB search
MEEDHSSREGNGFEIEDDDDKEHSVSMLREPFLVRNIKNNTSQIAIVGANTCPIESLDYE
IADNELFRQDWRSRKKVEIYQYVVLKWTLALLIGLGTGLVGFFNNLAVENIAGFKLLLTN
NLMLENKYYQAFATYAGCNVVLAIAAAALCAYVAPAAAGSGIPEVKAYLNGVDAPSILAP
ATLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIASLLGQGGSRKYHLTWKWLRYFKNDRD
RRDLVTCGSAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGLIDF
CRSGKCGLFGQGGLIMFDVNSRKAFYSTPDLLAVVFLGVIGGVFGSLYNYCVDKVLRTYS
LINERGPSFKILLVIVISLLTSCCSYGLPWLSKCIPCPPHLAEKCPTEGRSGNFKNFQCP
PNHYNDLASLVFNTNDDAIRNLFTSGSEKEFHLSTLMVFFFAIYCLGIVTYGIAVPSGLF
IPVILAGASYGRLIGTMLGPLSNLDAGLCALLGAASFLGGTMRMTVSLCVILLELTNDLL
MLPLMMLVLLISKTVADSFNKGIYDQMVRMKGFPYMEAHAEPYMRHLVASDVVSGPLVSF
SGIEKVGNLLLALKVTGHNGFPVIDEPPCSDAPELCGLVLRSHLLVLLRGKKFTKQRVKT
GSGIMKSFKAHDFAKAGSGKGVKLEDLEITEEEMEMYVDLHPITNTSPYTVVETMSLAKA
AVLFRELGLRHLCVVPKTPGRPPIVGILTRHDFTPDHILGLYPHIKPHK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggatcatagtagtagagaagggaatggatttgagatagaagatgatgatgat
aaggaacacagtgtgtcaatgttgagagagccgtttcttgttaggaatataaagaataat
acttcacagattgccattgttggtgccaatacctgccctattgaaagccttgattatgag
attgctgataatgaactttttagacaagactggaggtctcgaaagaaggttgagatatat
cagtatgttgtcctcaagtggacacttgctctcctcattgggttaggtacagggcttgtc
ggctttttcaataaccttgctgttgaaaacatagctggtttcaaacttctgttgacaaac
aatctcatgcttgagaacaagtactatcaggcatttgcaacttatgctggttgcaacgtg
gttttggctattgctgctgcagccctctgtgcttacgttgctcctgcagcagcaggctct
ggtatacctgaggttaaagcatacctcaatggtgtagatgctccttctattttggctcct
gctaccctctttgtaaagattttcgggtccatatttggagttgctgctggatttgttgtt
ggtaaagaaggacccatggtacatactggtgcttgcatagcctccttacttggacagggt
ggttctcgcaagtatcatttgacatggaaatggttgagatacttcaaaaatgatcgagac
cggcgagatttggttacatgtggttctgctgctggtgtagcagctgccttccgtgctcct
gttggcggggtcttatttgcccttgaagaagctgcttcctggtggaggagtgcccttctt
tggaggacgttctttacgacagctgtagttgcagtcgtattgagaggtctcatagatttt
tgccgatctggaaaatgtgggctatttggacaaggaggtctgatcatgtttgacgtaaat
tctagaaaagccttttacagcaccccagatctactagcagttgtgttccttggagtgata
ggaggcgttttcggaagcctttacaactattgtgtcgacaaggttcttcgcacgtacagc
ctcatcaatgagaggggtccttcgtttaagatcctgcttgttattgtcatttcccttttg
acctcttgttgctcctatggtctcccatggctttcgaagtgcattccctgtccccctcac
ctggccgagaaatgcccaactgaaggtcgctctggcaacttcaagaatttccagtgtcca
ccaaaccactacaacgaccttgcttccctcgttttcaacaccaatgatgatgccatccgc
aacctattcacttccggtagtgaaaaggaatttcacctctccacccttatggttttcttc
tttgctatttattgccttggcattgttacttacggcattgctgttccctctgggctcttc
atccccgtcattcttgctggggcctcttatgggcgtcttattggaacaatgcttggccct
ctgtctaatcttgatgcgggtctctgtgccctccttggagctgcctccttccttggtggc
accatgagaatgacagtttctctctgtgtcatacttcttgaacttactaatgatctgctt
atgcttccactaatgatgctagtgctcctcatttcaaaaacagtggccgatagtttcaac
aagggtatttatgatcaaatggtgagaatgaaaggatttccgtacatggaagcccatgca
gaaccatacatgagacatcttgttgcaagtgatgttgtttctggtccattagtttcattc
tctgggattgaaaaagtagggaacctgttgcttgctttgaaagtaacagggcataatgga
ttccctgtgattgatgagccgccttgttcagatgctccagaattgtgtgggcttgtcttg
aggtctcatctgcttgtgttgctaagaggaaagaaatttacaaaacagagagtaaagacg
ggatcagggatcatgaagagtttcaaggcacatgactttgcaaaggctggatcaggcaaa
ggggtgaagctggaggatttggagatcacagaggaggagatggagatgtatgttgatctc
catcctattactaacacatctccatacaccgtggttgaaacaatgtctctagctaaagct
gctgttctctttcgcgaacttggccttagacacttgtgtgtggtgccgaagacaccaggg
aggcctcctattgtcggaatcctgactcggcatgacttcacaccagatcatatactgggg
ctttacccacatattaaacctcacaagtag
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