Populus trichocarpa (black cottonwood): 18096631
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Entry
18096631 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18096631 isoform X1
KO
K20367
endoplasmic reticulum-Golgi intermediate compartment protein 3
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18096631
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
18096631
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPIIcoated_ERV
ERGIC_N
Motif
Other DBs
NCBI-GeneID:
18096631
NCBI-ProteinID:
XP_024448830
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All DBs
Position
3:complement(2448422..2464767)
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AA seq
386 aa
AA seq
DB search
MDRIYQKVRNLDAYPKINEDFYSRTLSGGLITLISSVLILFLFFSELSLYLHKVTETKLL
VDTSRGQSLRINFDVTFPAIRCSLLSVDAIDISGEQHLDIRHDISKKRINAHGDVIEVRQ
EGIGAPKIDRPLQSHGGRLGHNEEYCGSCFGGEMSHDDCCNTCEEVREAYRRKGWAMTNM
DLIDQCKREGFIQMIKDEEGEGCNINGSLEVNRVAGSFHFAPWKSFHLSNFLIQDLLDLQ
KDSYNISHRINRLAFGDYFPGVVNPLAGIQLMHDTPNGVQQFFIKVVPTIYTDIRGRTVH
SNQYSATEHFKKSELTPLDSLPGVYFFYDFSPIKVIFKEEHISFLHFMTSICAIIGGIFT
IAGIIDSFIYYGQRAITKKVGIGKFG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggatatatcagaaagtgcggaatttagacgcgtatccaaaaataaacgaggat
ttctacagccgtactctctccggaggccttatcactctcatctcttccgttctcattctt
ttcctcttcttctctgaactcagtttgtatcttcataaggttacggagacaaagctttta
gtggatacttcaagagggcaaagcctacgcatcaattttgatgtcacttttcctgccatt
cgatgttcgttgctcagtgtggatgccatagatatcagtggagagcagcatcttgatatt
aggcatgatatatctaagaaaaggatcaatgctcatggcgatgtaattgaagtccgtcag
gaagggattggtgctccgaagattgacaggcctttacagagccatggtggcaggcttgga
cataatgaggaatattgtggttcgtgttttggaggcgaaatgtcacatgatgattgttgc
aacacatgcgaagaagttcgtgaagcatataggagaaaagggtgggcgatgacaaatatg
gatttgattgaccaatgcaaacgtgaaggctttatccaaatgataaaagacgaagaaggt
gaaggatgtaatattaatggatccttggaagttaacagagttgctgggagttttcatttt
gctccttggaaaagcttccatctatcaaattttctgatacaggatttgctggatttgcaa
aaggatagttataatataagtcataggatcaatagactggctttcggtgactactttcca
ggcgtggtaaacccccttgctgggatacaattgatgcatgacacaccaaatggcgtgcag
cagtttttcattaaggtggtccctacaatatacactgatattcgaggccgcactgtgcat
tcgaatcagtactctgctacagagcatttcaagaaatcagaattgacaccccttgattct
cttcctggagtttacttcttctatgacttttctccaattaaggtgatattcaaagaggag
cacatttcatttttacacttcatgacaagtatttgtgctataatcggaggtattttcaca
attgcgggaataattgattccttcatatattatggtcaaagagcaatcacgaagaaagtg
ggaattggcaaattcggctga
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