Populus trichocarpa (black cottonwood): 18096695
Help
Entry
18096695 CDS
T01077
Name
(RefSeq) protein FAR1-RELATED SEQUENCE 8
KO
K17604
zinc finger SWIM domain-containing protein 3
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
18096695
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18096695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MULE
FAR1
ZSWIM1-3_RNaseH-like
SWIM
ZSWIM3_N
Motif
Other DBs
NCBI-GeneID:
18096695
NCBI-ProteinID:
XP_006385296
UniProt:
U5GHZ0
LinkDB
All DBs
Position
3:3505551..3509848
Genome browser
AA seq
732 aa
AA seq
DB search
MIEIEEGSQNSEQILEEEGDDLEFDSNDLEIEGDDPGIDDNDLGIEDNNLELEDKNLENE
GHDLPEGNDLEDNCEQLFDIEYHVLENNRDDATVEDVRNGDFLGKDYPPPFVGMQFESYD
DAYNYYNCYAKDLGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTSKEVHSRRKETRTGC
LAMLRLRLVESNRWRVDEVKLEHNHLFDPERAQNSKSHKKMDAGAKRKVEPTVDVEVRTI
KLYRTAAVDPLGYGSTNSNEGESSQHVDRSKRLKLKKGDAQIIHNYFCQVQLTNPNFFYL
MDLNDEGFLRNVFWIHYRSRAAYGYFSDVVIFDTTCLLNKYEIPLFAFVGVNQHGQSILL
GCGLLVDETFETYIWLFRVWLTCMLGRPPQTIITDQCKAMQGAIAEVFPRAHHRFCLSRV
AHKILDNLGMLQDYEGFQRTLNVTIHDSLKVDEFEMAWEDMIQRFGIADNEWLRTCYEDR
ERWVPVYSKDTSFAGISTFLKDESTQFFNGYVSQQTTLKEFFDMNELVLQKKYQKEALDD
FESRNSSPILRTGSFYELQLSRVYTNEIFRRFQDEVVMMSSCFGITQGHTSGPLVTYVIK
ERQGEENSRDIKNFEVMYDKRGAEVRCICSCFNFKGYLCRHALCILNYNGVEEIPPLYIL
ARWRKDLKRFYVPDGGSNNVDIANPVQWFDHLYRRAMQVVEEGMISQDRYMVAWQAFKES
LNKVRLVAEKHL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgattgagatagaagaaggttcccagaacagcgagcagatacttgaggaagaaggcgat
gatcttgaatttgatagcaacgacctcgaaattgagggcgatgaccctgggatagatgac
aatgaccttgggatagaagacaacaaccttgaactagaagacaaaaaccttgagaatgaa
ggacatgacctgcctgaaggcaatgacctggaggacaattgtgaacaactgtttgatatt
gaataccatgtccttgaaaacaacagagacgatgctacagtagaagatgttcgaaatggt
gacttcctagggaaggattatccaccaccttttgtggggatgcagtttgaatcatatgat
gatgcctataattattataattgctatgctaaagatttgggatttgctatcagggtcaag
tcctcatggacaaaacgtaacagcaaggagaaacgtggtgcggtgctctgctgcaactgt
gagggttttaagactagtaaagaagtgcacagtcgtagaaaggaaacgagaactggttgt
ctagccatgctaaggttgaggctagtggaatctaataggtggagggtggatgaagtcaag
cttgagcacaaccatttatttgatcctgagagagcacaaaattcgaagtcccacaaaaag
atggatgcaggggctaaaagaaaggtggagcccactgttgatgtagaagtacggacgatc
aaattgtatcgaacagctgctgtagacccactgggctatggaagcactaactcaaatgaa
ggagaaagtagccagcatgttgacaggtcaaagcgcttgaagcttaaaaaaggagatgca
cagatcattcataattatttttgtcaggttcagctaacaaatcccaactttttctacttg
atggatctcaatgatgaggggtttttgaggaatgtgttttggatacattataggtctagg
gctgcatatggttatttcagtgacgtagttatatttgacacaacatgcttattgaacaaa
tatgaaattccactctttgcatttgttggggtaaatcagcatgggcagtctattctactt
ggttgtggtttgcttgtggatgagacatttgaaacatatatatggctgtttagagtatgg
cttacatgcatgttgggtcgccctccacaaactatcattactgaccaatgcaaggccatg
caaggtgcaattgcagaggttttcccacgtgctcaccatcgtttttgtttgtcacgtgtt
gcgcacaagattcttgataatttgggcatgctgcaggactatgaagggtttcagaggacg
ctgaacgtgactatccatgactctcttaaggtagatgaatttgaaatggcttgggaagat
atgatccagcgttttggaattgcagataatgagtggcttcgaacatgctatgaagatcga
gagagatgggtcccggtttactccaaagatactagttttgctggaatatctacttttcta
aaagatgagtccacccaattcttcaatggttatgtgagtcaacaaactacgttgaaagag
ttttttgacatgaatgaactagttctacaaaagaagtaccagaaagaagctcttgatgat
tttgagtcgaggaattccagccccattttgaggacaggtagcttttatgagttacagctt
tccagagtgtatacaaacgaaatattcaggagatttcaagatgaggttgtgatgatgtcc
tcttgttttggcataactcaaggtcataccagtgggcctcttgttacttacgtgatcaaa
gaacgccagggtgaagaaaattcaagggatattaagaacttcgaggttatgtatgataaa
aggggagcagaagttcgttgtatctgtagttgcttcaacttcaaaggttacttgtgccgg
catgcattgtgcattctgaattacaatggggtggaggagatccctccgctgtatatcttg
gcacggtggaggaaggatttgaagcgcttttatgtaccggatggtggatccaataacgta
gatattgctaacccagttcagtggtttgatcatttgtacagacgagcaatgcaagttgtt
gaagaaggtatgatttctcaagatcgatatatggttgcatggcaagcatttaaagaatca
ctgaataaggtccgtcttgtagccgagaagcatttataa
DBGET
integrated database retrieval system
