KEGG   Populus trichocarpa (black cottonwood): 18096908
Entry
18096908          CDS       T01077                                 
Name
(RefSeq) novel plant SNARE 11
  KO
K08494  novel plant SNARE
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    18096908
Membrane trafficking [BR:pop04131]
 SNARE
  SNAP-25[N] (Qb)
   NPSN
    18096908
SSDB
Motif
Pfam: Sec20 V-SNARE_C Helo_like_N Prominin DUF948 Occludin_ELL MCPsignal DUF5089 Cauli_AT Syntaxin_2 BORCS6 Vps53_N DUF6988 Zw10_N Laminin_II MutS_III Wtap
Other DBs
NCBI-GeneID: 18096908
NCBI-ProteinID: XP_006385586
UniProt: B9N2U3
LinkDB
Position
3:11140503..11149401
AA seq 266 aa
MDPLSSISEELAEINGQIADIFRALSNGFQKLEKIKDVNRQSRQLEELTGKLRECKRLIK
EFDREMKDMESRNDPDTNKMLNEKKQSMIKELNSYVALKKQYATNLENNKRVDLFDGPNE
ELHDDNVLLASSMTNQQLVDHGNQMMDETDQAIERGKKVVQDTINVGTETAAALKAQTEQ
MSRIVNELDSIHFSIKKASQLVKEIGRQVATDKCIMALLFLIVVGVIAIIIVKLVNPSNK
DIRDIPGLAPPAPSRRLLWIPNQETS
NT seq 801 nt   +upstreamnt  +downstreamnt
atggatcctttatcgtcgatcagtgaagagctagcagagatcaatggacagatcgccgat
atttttcgagctttatcaaatgggttccagaaattggagaagattaaggatgtcaataga
cagagtaggcagctggaagaacttacggggaagctgcgggagtgtaagaggcttatcaaa
gagtttgacagagaaatgaaggatatggagagtagaaatgatccagacaccaacaaaatg
ctgaatgagaaaaagcagtcaatgatcaaagagttgaattcatatgttgctcttaaaaaa
caatatgcgaccaatcttgaaaacaacaagagagttgatctctttgatgggcccaatgaa
gagttacatgatgacaatgtgttgctagcttcgtctatgacaaaccaacagctagtggat
catggaaatcagatgatggatgagactgatcaggcaattgagaggggaaaaaaggttgtt
caagacaccatcaatgttggaacagaaactgcagcagctcttaaggctcagactgaacaa
atgagtaggattgttaatgagctcgactctatccatttctcaatcaagaaagcttcgcaa
ttggtgaaggaaattggtaggcaggttgcaactgacaagtgcattatggcattactcttc
cttattgttgttggagtcatagcaatcattattgtgaagctcgtgaacccaagcaacaag
gacattcgggatattccaggattagccccgcctgcaccgtctcgcagattactttggatt
cctaatcaagaaacaagctag

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