Populus trichocarpa (black cottonwood): 18096908
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Entry
18096908 CDS
T01077
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18096908
Membrane trafficking [BR:
pop04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
18096908
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
Helo_like_N
Prominin
DUF948
Occludin_ELL
MCPsignal
DUF5089
Cauli_AT
BORCS6
Syntaxin_2
Vps53_N
CdiA_C
DUF2203
Zw10_N
Laminin_II
Wtap
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
18096908
NCBI-ProteinID:
XP_006385586
UniProt:
B9N2U3
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All DBs
Position
3:11140503..11149401
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AA seq
266 aa
AA seq
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MDPLSSISEELAEINGQIADIFRALSNGFQKLEKIKDVNRQSRQLEELTGKLRECKRLIK
EFDREMKDMESRNDPDTNKMLNEKKQSMIKELNSYVALKKQYATNLENNKRVDLFDGPNE
ELHDDNVLLASSMTNQQLVDHGNQMMDETDQAIERGKKVVQDTINVGTETAAALKAQTEQ
MSRIVNELDSIHFSIKKASQLVKEIGRQVATDKCIMALLFLIVVGVIAIIIVKLVNPSNK
DIRDIPGLAPPAPSRRLLWIPNQETS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggatcctttatcgtcgatcagtgaagagctagcagagatcaatggacagatcgccgat
atttttcgagctttatcaaatgggttccagaaattggagaagattaaggatgtcaataga
cagagtaggcagctggaagaacttacggggaagctgcgggagtgtaagaggcttatcaaa
gagtttgacagagaaatgaaggatatggagagtagaaatgatccagacaccaacaaaatg
ctgaatgagaaaaagcagtcaatgatcaaagagttgaattcatatgttgctcttaaaaaa
caatatgcgaccaatcttgaaaacaacaagagagttgatctctttgatgggcccaatgaa
gagttacatgatgacaatgtgttgctagcttcgtctatgacaaaccaacagctagtggat
catggaaatcagatgatggatgagactgatcaggcaattgagaggggaaaaaaggttgtt
caagacaccatcaatgttggaacagaaactgcagcagctcttaaggctcagactgaacaa
atgagtaggattgttaatgagctcgactctatccatttctcaatcaagaaagcttcgcaa
ttggtgaaggaaattggtaggcaggttgcaactgacaagtgcattatggcattactcttc
cttattgttgttggagtcatagcaatcattattgtgaagctcgtgaacccaagcaacaag
gacattcgggatattccaggattagccccgcctgcaccgtctcgcagattactttggatt
cctaatcaagaaacaagctag
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