Populus trichocarpa (black cottonwood): 18096922
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Entry
18096922 CDS
T01077
Name
(RefSeq) ras-related protein RABH1b
KO
K07893
Ras-related protein Rab-6A
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18096922
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18096922
04031 GTP-binding proteins [BR:
pop04031
]
18096922
Membrane trafficking [BR:
pop04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
18096922
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
18096922
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
18096922
Exosomal proteins of bladder cancer cells
18096922
GTP-binding proteins [BR:
pop04031
]
Small (monomeric) G-proteins
Rab Family
Rab6/41 [OT]
18096922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
SRPRB
MMR_HSR1
RsgA_GTPase
FeoB_N
ATP_bind_1
TIR_2
AAA_7
Motif
Other DBs
NCBI-GeneID:
18096922
NCBI-ProteinID:
XP_006385600
LinkDB
All DBs
Position
3:complement(11337844..11341755)
Genome browser
AA seq
208 aa
AA seq
DB search
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTIRL
QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV
GNKTDLVEKRQVSIEEGEAKARELNVMFIETSAKAGFNIKPLFRKIAAALPGMEALSSTK
QEDMVDVNLKSTGGSASQNQAQSGGCAC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagtttcagctcttgcaaagtacaaactggtcttcttgggagaccaatcagtc
ggtaaaacaagcatcatcactcgcttcatgtatgataaattcgataacacctaccaggct
accattggcattgattttctatcaaagaccatgtacctcgaagacagaactattcgtttg
cagttgtgggatacagctggacaagaaagattcagaagcctcattccaagttacattaga
gattcctcagttgctgtcattgtatttgacgttgcaagtcggcaatcctttctgaatact
tcaaaatggattgaagaggttcgcactgagaggggcagcgacgtcatcattgtccttgtt
gggaacaaaactgaccttgtggagaaaaggcaagtttctatagaagaaggagaagctaaa
gctcgtgaacttaacgtcatgtttattgaaactagtgcaaaagctggttttaatatcaag
cctttgttccgaaaaattgctgcagcgttgccaggaatggaggcactttcttcaacaaag
caagaggacatggttgatgtgaacctaaagtctactggtggatctgcctcccagaatcag
gcgcagtcaggtggatgtgcttgttga
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