Populus trichocarpa (black cottonwood): 18096934
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Entry
18096934 CDS
T01077
Name
(RefSeq) aspartic proteinase CDR1
KO
K22683
aspartyl protease family protein [EC:3.4.23.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
18096934
Peptidases and inhibitors [BR:
pop01002
]
Aspartic peptidases
Family A1: pepsin family
18096934
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GFIT
Motif
Pfam:
TAXi_N
TAXi_C
Asp
Motif
Other DBs
NCBI-GeneID:
18096934
NCBI-ProteinID:
XP_006385613
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All DBs
Position
3:11468377..11469847
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AA seq
440 aa
AA seq
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MATFQSVLSFASAIALCVASFGCIYAHNAGFTTELVHRDSPKSPLYNSQQTHLQRWNKAM
RRSVSRVHHFQRTAATVSPKEVESEIIANGGEYLMSLSLGTPPFEILAIADTGSDLIWTQ
CTPCDKCYKQIAPLFDPKSSKTYRDLSCDTRQCQNLGESSSCSSEQLCQYSYYYGDRSFT
NGNLAVDTVTLPSTNGGPVYFPKTVIGCGRRNNGTFDKKDSGIIGLGGGPMSLISQMGSS
VGGKFSYCLVPFSSESAGNSSKLHFGRNAVVSGSGVQSTPLISKNPDTFYYLTLEAMSVG
DKKIEFGGSSFGGSEGNIIIDSGTSLTLFPVNFFTEFATAVENAVINGERTQDASGLLSH
CYRPTPDLKVPVITAHFNGADVVLQTLNTFILISDDVLCLAFNSTQSGAIFGNVAQMNFL
IGYDIQGKSVSFKPTDCTQL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttttcaatctgttctctcttttgcttcagcaattgcactctgtgttgctagt
tttggctgcatatatgcccacaatgctggatttactacggaactagtccaccgtgattca
ccaaagtcccccctttacaactctcaacaaactcacctccaacgttggaacaaagctatg
cgccgatccgttagtcgagtccaccattttcagagaactgctgctacagtctctccaaaa
gaagttgaatctgagattatagctaatggaggtgaatatctcatgagtttatccctcggg
acaccgccttttgagatcctggctatagcagatacgggcagtgatcttatatggacacag
tgcacgccatgcgacaagtgttacaagcaaattgctcctctttttgacccaaaatcctct
aagacatatagagacctctcttgtgacacaaggcaatgccaaaacctaggcgagagtagt
tcctgctcctccgaacagctttgccaatactcgtattattatggtgatcgatcctttacc
aatggaaatcttgccgttgatacagtcactttgccttccacaaatggcggtccagtgtat
ttccctaaaactgtcattggctgtgggcgtcgaaataatggaacctttgataagaaagat
tcaggtattattggccttggaggtggtccaatgtcccttatatctcaaatgggctcctct
gttggtggcaaattctcgtactgtctggtgccattttcctccgaatctgcaggaaactcg
agcaaattacattttggaagaaatgctgtggtttccggttctggagtccaatcaacccca
ttaatctcaaaaaatccagataccttttactatttaacactagaagccatgagtgttgga
gacaagaaaatagaattcggaggttcttccttcggaggcagtgagggcaacatcatcatt
gattcaggtacttccttgacattatttccagtaaatttcttcacggaatttgctacagcg
gttgaaaatgcagttattaatggagaacgcacccaagacgcaagtggattactgagtcat
tgttatcgccctactcctgatctaaaggttcctgtaatcactgcacatttcaatggtgca
gatgtggtgctccagactttaaatacctttatattaatttcagatgatgtcttgtgctta
gctttcaactcaactcaatctggtgcaatctttggaaacgttgcacaaatgaacttcttg
ataggctatgacattcaaggaaagtctgtgtcttttaagccgactgattgcacccaattg
taa
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