Populus trichocarpa (black cottonwood): 18096976
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Entry
18096976 CDS
T01077
Name
(RefSeq) probable ADP-ribosylation factor GTPase-activating protein AGD8 isoform X1
KO
K12493
ADP-ribosylation factor GTPase-activating protein 2/3
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18096976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18096976
Membrane trafficking [BR:
pop04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
18096976
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Gene cluster
GFIT
Motif
Pfam:
ArfGap
Motif
Other DBs
NCBI-GeneID:
18096976
NCBI-ProteinID:
XP_006385659
UniProt:
B9N2M5
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Position
3:11863376..11868080
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AA seq
404 aa
AA seq
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MASENFTDKNVVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAFHRSLGVHIS
FVRSTNLDSWSPEQLRTMSFGGNNRAQIFFKQHGWSDGGKTEAKYTSRAAELYRQLLSKE
VAKSMTEDAGLPSSPVASQAAQAANGLPDVKINDTPKESSVGKQETPDIVRSPKASHTVI
TSSVKKPLGAKRTGKTGGLGARKLTVKPSENLYDQKPEEPALPVPSTTNNTTTKSGTSFA
SRFEYVDNVQPAELISGDPQVISHVSPPKSSSFFAEFGMDSGFPKKGSSNSSKVQIQETD
EARKKFTNAKSISSAQYFGDQNKADADAQVSLQKFSGSSAISSADLFGHSDDQTIDLAAS
DLINRISFQAQQDISSLKNIAGETGKKLSSFASTFMTDLQDRIL
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggaaaatttcaccgacaagaacgtggtgttcagaaaactgaaagcgaaatcg
gagaacaagatgtgttttgattgtaatgccaaaaatcctacttgggcttctgtaacgtac
gggatcttcctttgcatcgattgctctgcttttcaccgtagtctcggtgtacacatcagc
tttgttaggtctacgaatttagattcatggagtccagagcaactgagaacaatgagcttt
gggggaaataatcgtgctcagattttcttcaagcagcatggatggagtgatggggggaaa
actgaggccaagtatacatccagagctgcggagttatataggcaattactttcaaaagaa
gttgctaaaagcatgactgaagatgctggcttgccatcatcacctgttgcttctcaggca
gcccaggcagcaaatggacttcctgatgtcaagattaatgacactcctaaagaaagctca
gtaggaaaacaagaaacacctgatatcgttcgttccccaaaagcttctcacacagtcatt
actagttctgtgaagaagcctcttggtgcaaagagaactgggaaaacagggggacttggt
gctagaaagcttactgtaaagcctagtgaaaatctctatgaccagaagcctgaggaacca
gcacttcctgtgccttccacaactaacaacaccaccacaaaatctggcacatcttttgca
tctcgttttgagtatgtagataatgtccaacctgctgagctgatttctggtgacccacaa
gtgattagtcatgtctctccaccaaagtcatcaagcttttttgcagagttcgggatggac
agtggttttcctaagaaaggaagctcaaactcctcaaaagttcaaattcaggaaacagat
gaagcaagaaaaaagtttacgaatgcaaaatcaatctcatcagcccaatattttggtgat
cagaacaaagctgatgctgatgctcaagtttcattgcagaaattttctggctcctctgct
atatcaagtgctgatctttttggtcacagcgatgatcagactattgatcttgctgcgagt
gacctcatcaatcggatctcattccaggctcaacaagacatctcttctctgaagaatatt
gcaggagagactgggaagaagctcagctccttcgcatcaaccttcatgactgatcttcag
gacaggatcctctaa
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