Populus trichocarpa (black cottonwood): 18097032
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Entry
18097032 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18097032 isoform X1
KO
K14295
nuclear pore complex protein Nup50
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18097032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
18097032
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18097032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
18097032
NCBI-ProteinID:
XP_024453057
LinkDB
All DBs
Position
3:complement(14201882..14207205)
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AA seq
474 aa
AA seq
DB search
MKGAKRFAVSDSLPDSNDTALRNKRIMAGLLFDVHRPEPSQQQLTPPLDVKRAESSQHHV
RALNNQFASWVQTQLKNHPDELWEDGIQDYLAHASNIMEMFSDVVNWLKANSAKGGSVAD
SLTTEKKLVPEIKNNESKLLQEKTGFALPSTSASFTSSWSSGVFSANQSSGGVSSSSQSS
SLFSNGESSATFSNNLGSGLFSNNQSSGFFSNSQTFGLYSNNQSSGSLSSGQSCGAFSNS
QTPFSINQSTGAVSNSQSLGALSNSQTPFSINQSTGAFSNSQTPFSFNQSSAAFSESQSL
GVLSNSQTPFSFGGQSSIPTTHNTADDADDENELQQPGSPSVKKSVEKGIVTVHEVKCKL
YVKSSDPAVKDTWKDKGTGQLSIKCKEGISKGAKESKPTIVVRNDVGKVLLNALLYPGIK
TNPQKNSLVAIFHTAGDDSGNNDSVVARTFLLRMRTEEDRNKLATAIQEYAPTS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggagcgaaacgatttgcagtttcagactcactccctgactccaatgacacggca
ttgcggaataaaagaataatggcaggattgctatttgatgttcatagacccgaaccatct
cagcaacaattgactcccccgttggatgtgaaacgggctgagtcatcacagcatcacgtg
agagctctcaataatcaatttgccagttgggttcaaacacaactgaagaaccatcccgat
gaactttgggaagatgggattcaagactaccttgctcatgcttcaaacattatggagatg
tttagtgatgttgtcaactggcttaaagcaaattctgcaaaaggaggatctgttgctgac
tctcttacaactgaaaagaaattagtgcctgagataaagaataatgagagcaaattactt
caagaaaaaactggttttgctctaccaagtacaagtgcaagctttacaagttcctggagc
tctggtgtgttttctgccaaccaaagttctggaggagtatcatctagtagccaaagctct
agtttattctccaacggtgaaagctctgctacattctcgaacaatctaggttctggtttg
ttctcaaacaaccaaagctctggattcttctcaaacagtcaaacttttggactctactcc
aacaatcaaagctctggctcattatccagcggccaaagttgtggagcgttctccaacagt
caaacacctttctccattaatcaaagcactggagcagtctccaacagccaaagtttagga
gcgctctccaacagtcaaacacctttctccattaatcaaagcactggagcattctccaac
agtcaaacacctttctcctttaatcaaagctctgcagcattctctgaaagccaaagttta
ggagtgctctccaacagtcaaacacctttctcatttggaggtcaaagctccatccccaca
acccataacactgcagatgatgctgatgatgaaaatgaattacagcaacctggcagtcca
tctgtgaagaagtctgtagagaagggtattgttacagtccatgaagtcaagtgcaagctc
tatgtgaagtcaagtgatccagcagttaaagacacgtggaaagataaaggcacagggcag
ctttccatcaaatgcaaagaggggataagcaagggcgcaaaagaatctaaaccaacaatt
gttgttcgaaatgatgtgggaaaagtgttactaaatgctttgctctatccaggaatcaag
acaaatccacagaagaattcccttgttgcaatatttcatactgcgggtgatgacagtggc
aataatgatagtgttgtggcacgcacttttttattaaggatgagaacagaggaggatcgg
aataagttagcaacagcaatccaagaatatgctccaacatcatga
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