KEGG T01077: 18097455

Populus trichocarpa (black cottonwood): 18097455

Entry

18097455          CDS       T01077

Name

(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC18097455

K23314

telomerase Cajal body protein 1

Organism

pop Populus trichocarpa (black cottonwood)

Brite

KEGG Orthology (KO) [BR:pop00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pop03032]
    18097455
   03400 DNA repair and recombination proteins [BR:pop03400]
    18097455
DNA replication proteins [BR:pop03032]
Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    18097455
DNA repair and recombination proteins [BR:pop03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     18097455

SSDB

Motif

Pfam:

WD40 Beta-prop_WDR5 Beta-prop_TEP1_2nd Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_EML WD40_WDHD1_1st Beta-prop_SCAP WD40_CDC20-Fz WD40_MABP1-WDR62_1st Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd

Other DBs

NCBI-GeneID:

18097455

NCBI-ProteinID:

XP_052307979

LinkDB

Position

4:complement(2677475..2680748)

AA seq 217 aa
MRIFAGYNKSIRIFDIHRPGRDFAQYSTTQGNKEGQPGIISAVAFSSTHTGMLATGSYNQ
TNAIYREDSMELLYILYGQEGGITHVQFSKDGNYLYTGGRKDPYILCWDVRKAVEVVYKK
VFIXYDLQNGQWISGFQAATDTVNGFSFHPFLPMAVSSSGHRXFQIPDDCDENLHLTSYE
NCASVWSFSCASMEEDDTNIPDGDFTRSENEILHQDH

NT seq 654 nt +upstreamnt +downstreamnt
atgaggatatttgctggatacaataaatctatcagaatctttgatatacatcgccctggt
agagattttgcacagtattcaactactcaaggaaataaagaagggcaaccaggtataata
tctgcagttgccttttcttcaactcacaccggaatgctagctactggttcttacaaccaa
acaaatgcaatctatagggaagacagtatggaactcttgtacattttatatggccaagaa
ggtgggattacacatgttcaattctcaaaggatggaaactatctttatactggaggcagg
aaggacccctatatcttgtgctgggatgtacggaaagctgttgaagttgtgtacaaaaaa
gtgtttatcnnttatgatctacaaaatgggcagtggatttcaggatttcaggctgcaaca
gacactgttaatggtttctctttccacccattccttcctatggcggtctcttcatcaggg
caccgatgatttcaaattcctgatgattgtgacgagaatttgcacttgactagttacgaa
aactgtgcatctgtgtggagtttctcctgtgcttcaatggaagaggatgacaccaacatc
cccgatggtgattttactcgatctgaaaatgaaatcctccaccaggatcattga

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