Populus trichocarpa (black cottonwood): 18097474
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Entry
18097474 CDS
T01077
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit D
KO
K03251
translation initiation factor 3 subunit D
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pop03012
]
18097474
Translation factors [BR:
pop03012
]
Eukaryotic type
Initiation factors
eIF-3
18097474
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GFIT
Motif
Pfam:
eIF-3_zeta
NARG2_C
Motif
Other DBs
NCBI-GeneID:
18097474
NCBI-ProteinID:
XP_006384030
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Position
4:3522290..3526155
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AA seq
572 aa
AA seq
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MVGGFEVGAVPFNPDGWGPPDATVTATTTSTLPLNVPFAPFSRSEKLGRIADFTRNLNQG
QGGAGGRKNAASDSVFDFTADDSFPSAADNDSSFRLVDGKPPPRPKFGPKWRFNQHNRPQ
LPQRRDEEVEAKKREAEKERARRDRHYNQNRSNQNQPRREAAVFKSSVEIQPEWNMLDQI
PFSTFTKLSFSVPEPEDLILCGGLEFYDKSFDRITPKAERRLERFKNRNFFKVTTTDDPV
IRRLANEDKATVFATDNILATLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHE
TSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLFRDGNKVAFDEPNPFANEGEEVASV
AYKYRRWKLDDDMHLVARCEVQSVVEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRG
AVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAS
QINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPE
EEQAQPPEENAENAEANGVTNDVEDKEIDVQA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggtaggcggcttcgaagtaggtgccgtccctttcaatcccgacggttggggtccaccg
gacgccaccgtcaccgccaccaccacctccacacttcctctcaacgtccccttcgctccc
ttctctcgctctgaaaagctcggccgaatcgctgatttcactcgcaatcttaaccaaggc
caaggcggagctggtgggcgaaaaaacgctgcatccgactccgtcttcgacttcactgcc
gacgattccttcccctccgccgctgacaacgactcctccttccgtctcgttgacgggaag
cctcctccgcggccgaagtttggacctaagtggcggttcaaccagcacaaccgccctcag
ctaccgcaacgtcgcgatgaggaagtggaggcgaagaagcgcgaggcggagaaagagagg
gctcgtagggaccggcattataatcaaaaccggtccaatcagaatcagccacgtagggaa
gcggcagtgtttaagagttctgtggagatccaacctgaatggaatatgcttgatcagatt
ccgtttagtacatttacgaaactgtctttctcggtcccggaaccagaggatttgatttta
tgtggtgggttagagttttatgataagagttttgatagaatcacaccgaaagcagagcgg
agattggaaaggtttaagaataggaatttctttaaggtaactaccactgatgatcctgtt
attagaagattagctaatgaagacaaagctaccgtttttgctactgataatattttagct
acgttgatgtgcgcaacccgctctgtttattcttgggatattgtggttcaaagggtggga
aataagttgttttttgataaaagagatggatctcagcttgatttgttgtcagttcacgag
acatcacaggagcctttaccagaggctaaggatgatataaactcggcatattcattgagt
gttgaggctgcttatattaatcagaacttttcgcagcaagttttgtttagggatgggaat
aaggttgcatttgatgagcctaacccgtttgccaatgaaggggaggaggttgcatccgtg
gcttataagtataggaggtggaaattggatgatgatatgcatcttgttgctaggtgtgaa
gtgcagagtgttgttgaggttaataagcaaaggtcgttcttgacattgaatgcgcttaat
gagtttgatcccaagtattctggtgttgattggagacagaagttggagactcaaaggggt
gctgttttggctactgaattgaagaacaatgcgaataaattggctaaatggactgctcaa
gctttgttggctagtgctgatatgatgaagttagggtatgtttctagggtccatccaagg
gatcatttcaatcatgtgattttggctgttgttggatataagcctaaggactttgcttct
cagattaatttgaatacctccaacatgtggggtattgtcaagagtattgttgacttgtgc
atgaaattgaatgagggtaagtatgtgctggtgaaagacccgtctaagccacaagtgagg
atttatgaggttcctgctgatgcgtttgagaatgattatgtggaggagcctttgcccgag
gaggaacaagcccagcctcctgaggagaatgctgagaatgccgaggcaaatggggttacc
aatgatgtggaagataaagagattgatgttcaagcttga
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