Populus trichocarpa (black cottonwood): 18097602
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Entry
18097602 CDS
T01077
Name
(RefSeq) protein DETOXIFICATION 14 isoform X1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18097602
Transporters [BR:
pop02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
18097602
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
18097602
NCBI-ProteinID:
XP_024455077
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Position
4:8094138..8103148
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AA seq
486 aa
AA seq
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MEGEGKREERKWAITWEGFVQELKKAGCIAAPMVAVSVLQYLLQVVSVIIVGHLGALALS
SAAIATSITNVTGFSLLSGMAGGLETLAGQAYGAKQYQKLGTYTYSAIISLIIMCPPICV
LWIFMGKLLPLLGQDTSISQEACKYSMYLIPALFGGAVLKPLTRYLQTQSVILPMLITSS
CILCFHTISCWILVYKLQLGQKGAAIAFSLSTWLNVILLCLYVKYSSACEKTRAPLSREA
LYGIREFFQLGVPSAIMVCLKWWSLELLILLSGLFKNPKLETSVLSICLTISTLHFTIPY
GFGAAASTRVSNELGAGNPQLARMAVLVALFLAGIESVIVSSGLFLSRQVLGYAYSNDRQ
VVRYISVMTPLICLSFITDSLQAVLSGVARGCGWQKIGAYINLGSFYLVGLPLAAVLGFV
AHLRGKGLWIGILVGSFVQSVLLSIVTACTDWNKQVLGPISFFFPSTSLPCICFHVLFYY
RLHQVQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagagggaaagagggaagagagaaaatgggcgataacatgggaaggatttgtt
caagagctaaagaaggcaggttgtatagcagctccaatggtggccgtgtcagtattgcag
tatctcctacaagttgtgtctgtgataattgtagggcaccttggtgcacttgcactctct
agtgccgccattgccacttctattaccaatgttacagggtttagccttctttcaggaatg
gcaggtggactggaaactctagctggccaagcatatggagctaaacaatatcaaaagctt
ggaacctatacttacagtgcaatcatctctctaataatcatgtgccctccaatttgtgtc
ctgtggatcttcatgggcaaactactacctctactaggccaagacacttcaatctcacaa
gaggcctgcaagtactcaatgtatctaatccctgcattatttgggggtgcagttcttaag
cctttgactagatatcttcagacacaaagtgtgattctaccaatgctcataacctcatct
tgcatcctatgttttcacaccatttcatgctggattcttgtgtacaaactgcaattagga
caaaagggtgcagctatagccttcagtttatcaacttggttgaatgtgatattgctatgc
ctgtatgtaaagtactcctcagcatgtgaaaaaactagagctccattgtcaagagaagca
ctttatggtatcagagaattctttcagctcggtgtcccttctgctattatggtttgtctt
aaatggtggtcattggagttgctgattttgctttctggtcttttcaaaaatccaaaactg
gagacttcagtgctttctatatgcctcacaatctctacattgcacttcaccataccatat
ggatttggagctgctgcaagcacacgagtttcgaatgaactaggagctgggaatcctcaa
ttagctaggatggcagttctggttgccttgtttcttgctggcatagagtcagtcattgtg
agctcaggactcttcctttcccggcaagttttgggatatgcttacagcaacgacaggcag
gttgtgcgttatatttcagtcatgactcctctgatttgtctctcatttatcacggacagc
ttacaagctgtcctttctggtgtggctagaggatgtggatggcagaaaataggggcatat
atcaatcttggttcattttatctggttggacttccattggctgctgtgcttggttttgta
gctcatttaagaggaaaaggcctttggattggaatattagttgggtcatttgtgcaatca
gttcttctttctatcgttactgcttgtacagattggaacaaacaggtccttggtccaatc
tcttttttctttccttcaacttctctcccttgtatatgttttcatgtgctgttctattat
aggctccatcaagtgcaatga
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