Populus trichocarpa (black cottonwood): 18097672
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Entry
18097672 CDS
T01077
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
18097672
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
18097672
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
18097672
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
18097672
NCBI-ProteinID:
XP_006384269
UniProt:
U5GIG6
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All DBs
Position
4:complement(10418717..10422473)
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AA seq
504 aa
AA seq
DB search
MLKMWKTEDSGEEWEMKLKLCGGGKFKKLKTSVVSRSPMKLWMTRAITTVLLWTCVVHLM
SMGETWGPRLLKSWTSCYSHQDVELISVPAEVILPPKRVYKNNGYLMVSCNGGLNQMRAA
ICDMVAIARYLNVTLIVPELDKTSFWNDPSEFQDIFDVHHFIASLRGEVRILKELPPRLK
TRVELGLFYSLPPVSWSNISYYTHQILPLLQKFKVVHLNKTDARLANNGLPLEIQKLRCR
VNFNAFKFTSKIEELGRKVVKILREKGPFLVLHLRYERDMLAFSGCTHGCNDEEVEKLTR
MRYAYPWWKEKVINSEMKRKEGLCPLTPEETALVLTALGIDRNVQIYIAAGEIYGGERRM
KTLMEAFPNLVRKEDLLEPSDLKFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEG
HRRFLGFKKTSLLDRKLLVGLIDEYNKGSLSWDEFSSTVKETHADRMGSPKRRVVIPDKP
KDEDYFYANPQECLQLLDEPLRST
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatgtggaagacagaggactctggtgaggaatgggagatgaaattgaaatta
tgtggtggtggaaagtttaaaaagttgaaaacttctgtggtttcaaggtctccaatgaag
ctatggatgacaagggcaatcacaactgtattgttatggacttgtgtggttcatttgatg
tcaatgggagagacctggggcccgagattgttaaagagttggacatcttgttatagtcat
caagatgttgagttaatttctgttcctgccgaagttattcttcctccaaagagagtttat
aagaataatgggtatctcatggtttcctgcaatggaggactgaaccaaatgcgagcagca
atatgtgacatggtcgctattgcaagatatctaaatgttactcttatagtcccagagttg
gataaaacctcattttggaatgacccaagtgagtttcaagacatatttgatgttcatcat
ttcatcgcttccttgaggggtgaggttcgaatattgaaagagctaccgcctaggctcaaa
acacgagtagaattgggattgttctactcattacctcctgttagctggtcaaacatttct
tactacacccatcagatccttcctctgctgcaaaagttcaaagttgtacatttgaacaaa
acagatgctcgccttgctaataatggacttcctcttgagattcaaaagttgcgctgccga
gtaaattttaacgctttcaagtttacgtcaaagatagaagaactgggtagaaaggttgtt
aagatattgagggagaaaggccctttcctggtgcttcatctcagatatgaaagggacatg
ctggctttctctggctgcactcatggttgcaatgatgaggaagtagaaaaactgacaaga
atgagatatgcttatccctggtggaaggaaaaagttattaattctgaaatgaaaaggaaa
gaaggtttgtgtcctttgactcctgaggaaactgcccttgtgttaactgcacttggaatt
gatcgtaatgttcaaatttatattgctgccggagaaatatatggtggggaaagaaggatg
aagactttgatggaagcttttcctaatttggtcaggaaagaggatctgttggaaccatca
gatttgaagtttttccagaaccattcatctcaaatggcagcactagattatctggtgtcc
ctagagagtgacatatttgttcctacatatgatggcaatatggctaaagttgttgaaggt
catcgcagattcttggggttcaagaagactagtttgttggacagaaagcttctggtaggt
ttaatagatgaatacaacaaagggtcattgagctgggatgaattctcctccactgtgaag
gaaactcatgctgatcggatgggtagcccaaagaggcgagtcgttataccagataaacca
aaggatgaagattatttttatgccaatccgcaagagtgtttgcaactgttagatgaacca
ttgagaagtacatga
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