Populus trichocarpa (black cottonwood): 18097753
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Entry
18097753 CDS
T01077
Name
(RefSeq) probable manganese-transporting ATPase PDR2 isoform X1
KO
K14950
manganese-transporting P-type ATPase [EC:7.2.2.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18097753
Transporters [BR:
pop02000
]
Other transporters
Primary active transporters [TC:
3
]
18097753
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
2TM_P5A-ATPase
E1-E2_ATPase
Hydrolase
Cation_ATPase
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
18097753
NCBI-ProteinID:
XP_006384374
UniProt:
U5GIQ5
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All DBs
Position
4:complement(15808837..15820659)
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AA seq
1188 aa
AA seq
DB search
MVLRFNVGGKVVERVDLIRKKKWPWRLDIFPFAILYAIWMVTVVPSIDIVDAFIVLGGLV
AIHVLVLLFTAWSVDFKCFVQYSKVNDIRAADTCKVTPAKFSGSKEVVPLYIRQQSATSS
SPGDGEEIYFDFRKQWFIYSKENETFCKLPYPTKETFGHYLKSTGHGSEAKVAAATEKWG
RNVFEYPQPTFQKLLKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKS
RLKTLSELRRVRVDTQTIMVHRCGKWVKLSGTDLLPGDVVSIGRSSGQHGEDKSVPADML
LLAGSAILNEAILTGESTPQWKVSITGRGMEEKLSAKRDKNHVLFGGTKILQHTPDKNFP
LRAPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYV
LKKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIP
FAGKVDICCFDKTGTLTSDDMEFRGVVGLTESADLESDMTKVPVRTAEILASCHALVFVD
NKLVGDPLEKAALTGIDWSYKSDEKAMPKKGGGNAVQIVQRHHFASHLKRMAVVVRTQEE
FLAFVKGAPETIQDRLIDLPPSYVDTYKKYTRQGSRVLALAFKYLPDMTVSEARSLDRDV
VETGLAFAGFAVFNCPIREDSASVLSELKNSSHDLVMITGDQALTACHVASQVHIISKPA
LILGPSRSGEGYEWISPDEMEKISYGDKGAEELSETHDLCIGGDCIDMLQQSSAVLQVIP
YVKVFARVAPEQKELILTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNAVPPTKSGN
SSSETPKDGNLKPSKSKKSKPEVSNLNGESSSRAKAVTKSDSSSQTAGNRHQTAAEMQRQ
RLKKLMEEMNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMF
KILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISQARPLPTLSAERPHPH
VFCFYVFLSLMGQFAIHLFFLMSSVKSAEKYMPDECIEPDSDFHPNLVNTVSYMVSMMLQ
LATFAVNYIGHPFNQSITESKPFLYAILAAAGFFTVITSDLFRNLNDWLKLVPLPPELRN
KLLIWALLMFLSCYTWEKLLRWAFPGRIPSWKKRQRLAAANLEKKKRV
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgaggtttaatgtaggggggaaagtagtggagagagtagatttgataaggaag
aagaaatggccatggcgcttagatatttttccatttgcgattttgtatgcgatttggatg
gttacggttgtgccgagcattgacattgttgatgcttttattgttcttggtggactcgtt
gctattcatgttcttgttttgcttttcactgcctggtctgttgatttcaagtgctttgtt
cagtacagtaaggttaatgatatccgagctgcggatacttgtaaagttacgccggccaag
ttttccggttccaaagaagttgtgccgttgtatattcgtcaacaatcggcaacatcctca
tcaccaggggatggggaagagatttactttgatttcagaaagcagtggttcatctattca
aaggagaatgagacattttgcaagcttccttaccctaccaaggaaacatttggccactat
cttaaaagtactggccatggttctgaggctaaagtagctgctgcaactgagaaatgggga
cggaatgtatttgaatatccacagcccacattccaaaaattattgaaagagcagtgcatg
gagcccttttttgtatttcaggtgttctgtgtggggctttggtgcttggatgaatattgg
tattacagcttgtttaccctctttatgctgtttatgttcgagtcaactatggcaaagagt
aggttgaagactctaagcgagctaagacgtgttagagtggatacccagaccataatggtg
catcgctgtgggaaatgggtgaagctctccgggactgatcttttacctggtgatgttgtc
tccattggacgctcttctggtcagcatggagaagataaatctgtaccagcagacatgctt
cttttagctggaagtgccattctgaatgaagccattctcactggcgagtctactccccaa
tggaaggtttcaatcacgggtagagggatggaggagaagttatcagccaaacgcgataag
aaccacgttttatttggtgggactaaaattttgcagcatactccagataagaactttccc
ctaagggctcctgatggcggttgtctagctgttgttcttcgaactgggtttgaaacaagt
caagggaaactaatgaggaccattttgttttccacagaaagggttactgccaatagttgg
gaaagtgggttgttcatcctatttttagtcgtgtttgcagtaattgctgctggttatgta
cttaaaaagggactagaggatcccacgaggagcaagtacaagcttttcctgagttgttca
cttatcataacatctgtaattccacctgagctgccaatggaattatcaatagcagttaat
acgtctcttattgcattggcacggcgtggaattttttgtaccgaaccttttcgcatcccg
tttgcaggaaaggttgatatatgttgtttcgataaaactggaacacttacatcagatgac
atggagttccgtggagttgttgggttgacagagagtgcagatttagaatctgatatgact
aaagtgcctgtccgaacagcagaaattttggcctcttgtcatgccttggtgtttgtggat
aacaaactggttggtgatcctcttgagaaggctgcacttacaggaatagactggagttat
aaatctgatgaaaaggcgatgcccaaaaaaggaggtggcaatgccgtgcagattgttcag
agacatcactttgcatcccatttgaaacgaatggcagttgttgttcgcacacaggaggaa
ttcttggcatttgtgaagggtgcacctgaaactattcaggatagactcattgacttgcca
ccatcatatgttgatacatataaaaagtacacacgtcaagggtctcgagttctggccctt
gctttcaagtaccttccggacatgacagttagcgaagctagaagcttggacagagatgta
gtggagactggtcttgcatttgctggctttgcagtattcaactgccctataagagaggat
tctgctagtgtattgtctgaattaaagaattcatctcatgacttggtgatgatcactggt
gaccaagctttgacagcttgccatgttgctagccaagtgcatatcatatcaaagccagca
ttaattcttggtccatcaaggagcggagaaggatatgagtggatatctccagatgaaatg
gagaaaatcagttacggtgacaaaggggctgaagaattgtcagagactcatgatctctgt
attggaggtgactgtattgacatgttgcaacagagttctgctgtcctacaagtcattcct
tatgtcaaggtttttgcaagagttgctcctgagcaaaaggaactcatcttgaccactttc
aaaactgtagggagggtcacgctgatgtgtggggatggaaccaatgatgttggagctttg
aagcaggcccatgtaggagttgcactgttgaatgcagtgcctccaacaaaaagtggaaac
tcttcatcagaaacacctaaagatggaaatctgaagccttcaaagtcaaaaaaatcgaag
cctgaagttagtaatctaaatggagaaagttcttctagagccaaagctgtcacaaaatca
gattccagcagtcaaacagctggtaaccgccaccagacagcagcagaaatgcaacgacag
aggttgaagaagctgatggaagagatgaatgaggaaggtgatggtcgttcagcccccatt
gtcaagcttggagatgcctcaatggcttctcccttcacagcaaagcatgcatcagttgcc
cccaccacagacataattcgtcagggtcgcagtactcttgtgactaccctccagatgttt
aaaatacttggtcttaactgccttgctacagcatatgtgttgagcgtcatgtatctggat
ggtgtcaagcttggtgatgtgcaggccacaatcagtggtgtctttacggctgcttttttc
cttttcatttcccaagcacgcccccttcccacactttcagctgaaaggccccaccctcat
gttttctgcttctacgttttcctttctctcatgggacagtttgcaatccacctgtttttt
ctgatgtcgtctgtgaaaagtgctgagaaatatatgcctgatgaatgcattgaacccgac
tctgattttcatccgaatctggtgaacaccgtttcatacatggtgagcatgatgctccag
ctagccacttttgctgtgaactatatcggccatcctttcaaccagagcatcacagaaagc
aaaccattcttgtacgccatcttggctgctgcaggtttcttcacggtgatcacttctgac
cttttcaggaacttgaatgactggttgaaattggtgcccttgccaccagaactgaggaac
aagcttttgatttgggctttgctcatgttcctgagctgctatacatgggagaaattgttg
agatgggctttccctggtaggattccatcttggaagaaacgacaacggttggctgcagcc
aatttagagaagaagaaacgtgtctga
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