Populus trichocarpa (black cottonwood): 18097822
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Entry
18097822 CDS
T01077
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP40
KO
K05864
peptidyl-prolyl isomerase D [EC:
5.2.1.8
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
18097822
Enzymes [BR:
pop01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
18097822
Chaperones and folding catalysts [BR:
pop03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
18097822
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
TPR_1
TPR_2
TPR_11
TPR_8
TPR_CcmH_CycH
TPR_7
TPR_16
TPR_14
TPR_6
MIT
TPR_12
TPR_19
TPR_IF140_C
Motif
Other DBs
NCBI-GeneID:
18097822
NCBI-ProteinID:
XP_024454299
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Position
4:complement(16696794..16700415)
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AA seq
370 aa
AA seq
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MGRPRCFLDISIGGELEGRIVVELYNDVVPKTAENFRALCTGEKGIGPNTGVPLHYKGCR
FHRVIKGFMVQGGDISAGDGTGGESIYGLKFEDENFELKHERKGMLSMANAGPNTNGSQF
FISTTRASHLDGKHVVFGKAVKGIGVVRSIEHVTTGDAECPTSDVMIVDCGEIPEGADDG
TCNFFKDGDAYPDWPADLYESPSELSWWMNAVDSIKASGNEHFKKQDYKMALRKYRKALR
YLDICWEKEGIDEEKSSALRKTKSQTFTNSAASRLKLGDLKGALVDTDLAIRDWENNAKA
LFRQGQAYKALNDVDAAAESFKKALQLEPNDAGIKRELNAARKKVNERRDQERRRYEKMF
ETSNSTAVEP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggccaaggtgttttttagacataagcatcggaggggagttagaaggaaggata
gtagtagagctctacaacgatgtcgttcctaaaactgctgagaattttagagctctctgc
actggtgagaaaggcattggacctaacaccggtgtccctcttcactacaagggatgtcgt
tttcatcgtgttatcaaaggttttatggttcaaggaggagatatctctgcaggagatggc
actggaggggaatctatttatggcttgaaattcgaggatgagaatttcgaactgaaacat
gaaaggaaaggaatgttatctatggcaaatgctggtccaaacacaaatggttcgcagttc
tttatctcgacaactcgcgcctctcatttggatggaaaacatgttgtatttgggaaggct
gttaaaggaattggagttgttcgttctattgagcatgttacaactggtgatgctgagtgt
cccacttctgatgttatgatcgtcgattgtggagaaattcctgagggtgcagatgacggg
acatgtaatttcttcaaggatggtgatgcttatcctgattggccagctgacctttatgag
agtcctagtgaactttcatggtggatgaatgctgtagattctattaaggcttctggaaat
gaacatttcaagaaacaagactataagatggcgctaagaaagtatcggaaggctttacgc
tatctggatatctgttgggagaaagaagggattgacgaagagaagagttcagctttgagg
aagacaaagtcacagacattcacaaacagtgcagcatctaggttaaaattgggggatctg
aaaggagcactggtggacacagaccttgcaatacgtgactgggaaaacaatgcaaaagct
ctgtttcgccagggacaggcatacaaggctcttaatgatgttgatgcagctgctgaaagc
ttcaaaaaggcattgcagttggagccaaatgatgctggaataaaacgggagcttaatgct
gctaggaagaaggttaacgagagacgtgatcaggagagaaggcgatatgagaagatgttc
gaaacttcaaatagcactgctgtagaaccctag
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