Populus trichocarpa (black cottonwood): 18097831
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Entry
18097831 CDS
T01077
Name
(RefSeq) protein TRI1 isoform X1
KO
K15223
upstream activation factor subunit UAF30
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
18097831
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
18097831
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
CCDC106
DARPP-32
Sporozoite_P67
Motif
Other DBs
NCBI-GeneID:
18097831
NCBI-ProteinID:
XP_024454192
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Position
4:complement(16780377..16787244)
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AA seq
380 aa
AA seq
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MVSDSDLVTRLREILRRSDLDTATAGSIRRQLEEDLGVDLSEKKKFIREQIDTFLETFNG
GEGKSENVSENENTENDAVGDEENENDAVKEEEEEVETETKESKGSNKTGKVRKRGGFTK
LSSLSPQLQAVVGVPELARTEVVKKLWAYIRENNLQDPKNRKKIKCDEALRAVFRVNSID
MFQMSKALSKHIWPLTGEDESVKQKEKCEDSNDFGNEGDNGGEEEEEQEEEEEEEVKKES
NGRSKKGRKSAKVDENVKKRGGGFTKLCSLSPQLQELVGVPELARTGVVKKLWAYIREKN
LQDPKNKRNIICDESLRALFDVDSIDMFQMNKALSKHIWAVCEEDAPSNSSPKEKGAKQG
REEDPDEPKQKEKRQKKGSC
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcggactcggacctcgtgactcggctccgtgaaatactcaggaggtcggacttg
gacacggccactgccggcagtatacggcggcagttggaggaggatctcggcgttgattta
tcggagaaaaagaagtttattagagagcaaattgatacttttctcgaaacctttaatgga
ggagaaggtaaatcagagaatgtgtcagaaaatgaaaataccgaaaacgacgccgttggt
gacgaggaaaatgaaaacgacgccgttaaagaagaagaggaagaggtagagactgagaca
aaggaaagcaaagggtcaaacaagacaggaaaagtgaggaaaagaggtggctttactaaa
ttaagtagcttatctccacaacttcaagcagttgttggagtgcctgaattggccagaact
gaggttgtgaagaagctttgggcctatatccgcgagaacaacttgcaggatccaaagaat
aggaaaaaaataaaatgtgatgaagcattgcgtgctgtcttccgtgtaaattcaattgac
atgtttcaaatgagcaaagccctgtccaagcatatttggccattaactggagaagatgaa
agtgtaaaacagaaagaaaaatgtgaagacagtaatgattttgggaatgaaggagacaat
ggaggggaagaggaggaggaacaagaagaggaggaagaggaagaggtaaagaaagagagt
aatggaagaagcaagaaaggacgtaaatctgctaaggtggatgaaaatgttaagaaaaga
ggaggcggctttactaaattgtgcagtctttctcctcaacttcaagagcttgttggtgtt
cctgaattggccagaactggggttgtgaagaagctctgggcctatatccgggagaagaat
ttgcaagatccaaagaataagcgaaacataatatgtgatgaatcactgcgtgctcttttt
gatgttgattctattgacatgtttcaaatgaataaagccctgtccaaacacatatgggct
gtctgtgaggaagatgctccaagcaactcttcaccaaaggaaaagggggctaaacaagga
agagaagaagatcctgatgaacctaaacagaaagaaaaacggcagaagaaaggatcctgc
tga
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