Populus trichocarpa (black cottonwood): 18098041
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Entry
18098041 CDS
T01077
Name
(RefSeq) ubiquitin isoform X2
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03010
Ribosome
pop04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
18098041
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18098041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pop03011
]
18098041
04121 Ubiquitin system [BR:
pop04121
]
18098041
Ribosome [BR:
pop03011
]
Ribosomal proteins
Eukaryotes
Large subunit
18098041
Archaea
18098041
Ubiquitin system [BR:
pop04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
18098041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ribosomal_L40e
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
HATPase_c
Motif
Other DBs
NCBI-GeneID:
18098041
NCBI-ProteinID:
XP_006384722
LinkDB
All DBs
Position
4:complement(20753950..20755252)
Genome browser
AA seq
110 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSYTVDNVKAKIQDKEGIPPEQQRLIFAGKQLEDSRTLASYD
IQKESTLHLVLRLRGGKGAPSMKIEPSLRELARKFNQYKLICRRFCFIAG
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgcagatatttgtgaaaaccctaactgggaagactattactctcgaggttgagagtagt
tacacagttgacaatgtcaaggccaaaatccaagacaaggaaggaattccgccggaacaa
cagaggttgatttttgctggaaagcaacttgaagatagccgtaccttagctagttacgat
atccagaaagaatccacacttcatctagtcttgaggcttaggggaggaaaaggagctcct
agcatgaaaattgagccctccctgagggaactagctcgtaaattcaatcaatacaagctg
atttgccgcagattttgtttcatagccggttga
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