KEGG   Populus trichocarpa (black cottonwood): 18098041
Entry
18098041          CDS       T01077                                 
Name
(RefSeq) ubiquitin isoform X2
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03010  Ribosome
pop04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    18098041
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    18098041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pop03011]
    18098041
   04121 Ubiquitin system [BR:pop04121]
    18098041
Ribosome [BR:pop03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    18098041
  Archaea
    18098041
Ubiquitin system [BR:pop04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   18098041
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ribosomal_L40e Ubiquitin_2 Rad60-SLD_2 Dsc3_N DUF2604 TBK1_ULD Ubiquitin_5 OTU1_UBXL HATPase_c
Other DBs
NCBI-GeneID: 18098041
NCBI-ProteinID: XP_006384722
LinkDB
Position
4:complement(20753950..20755252)
AA seq 110 aa
MQIFVKTLTGKTITLEVESSYTVDNVKAKIQDKEGIPPEQQRLIFAGKQLEDSRTLASYD
IQKESTLHLVLRLRGGKGAPSMKIEPSLRELARKFNQYKLICRRFCFIAG
NT seq 333 nt   +upstreamnt  +downstreamnt
atgcagatatttgtgaaaaccctaactgggaagactattactctcgaggttgagagtagt
tacacagttgacaatgtcaaggccaaaatccaagacaaggaaggaattccgccggaacaa
cagaggttgatttttgctggaaagcaacttgaagatagccgtaccttagctagttacgat
atccagaaagaatccacacttcatctagtcttgaggcttaggggaggaaaaggagctcct
agcatgaaaattgagccctccctgagggaactagctcgtaaattcaatcaatacaagctg
atttgccgcagattttgtttcatagccggttga

DBGET integrated database retrieval system